Conserved Protein Domain Family
YAF2_RYBP
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pfam17219: YAF2_RYBP 
Yaf2/RYBP C-terminal binding motif
This motif is found in the Yaf2 and RYBP proteins that are homologous parts of the PRC1 complex. This motif forms a beta hairpin structure when it binds to the RAWUL domain pfam16207.
Links
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Statistics
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PSSM-Id: 496418
Aligned: 13 rows
Threshold Bit Score: 39.3003
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_011134986 103 PPRLKNIDRSTAQSNEVTVNNVTVVITEYKPKV 135
XP_002428005  99 LRKLKNVDRNSAETREVTVNNITVMITEYKPKP 131
ERL96038     145 LPRLKNVDRSTAQTREVTVNSITVVITEYKPKI 177
XP_032522038  85 PPRLNNVDRSSAQTREVTVSGVTVVITEYKPKK 117
VDD95668     126 SDSL--IIRSSAKKRMVSVKGVTACITEFRPRN 156
EFX70578      99 RPRLKNVDRSTAMHKEVTVNNVTVVITEFRPKI 131
XP_009060507  90 RSRLKNIDRLGGEKMEVTVNDVTVLITDYKPKQ 122
XP_011791487  60 RPRLKNVDRSSAQHLEVTVGDLTVIITDFKEKT 92 
XP_002111440  78 RPRLKNVDRDSGQQMAVTVGSVTVIITDYKELK 110
EEC06567      83 RPRLKNVDRSTGQQRAVTVNNVTVIITEFQPKR 115
2_pfamImport   1 KMKLKNIDRTNFLAQAVTVNNVTVIITEFQPKK 33 
XP_015781663 248 TSKLKNIDRNNCSSEAVTVNNVTVIITEFLSDL 280
XP_026690924  99 RHRLKGVDRSSPMTMAVTVNNVTVLFTEFRAKK 131 vase tunicate
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