5C0W


Conserved Protein Domain Family
Rrp44_S1

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pfam17215: Rrp44_S1 (This model is not part of the current CDD release)
S1 domain
This domain corresponds to the S1 domain found at the C-terminus of ribonucleases such as yeast Rrp44.
Statistics
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PSSM-Id: 522761
Aligned: 60 rows
Threshold Bit Score: 89.5064
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5C0W_J        915 STETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNS-AA-FDEVEYKLTFVPTNSDKP--RDVYVFDKVEVQVRSVM 990  Saccharomyces...
XP_002911164  912 IVEDAFVIRAFRNGLGVFISALGIEGLVTFKk-------dMQ-FDAENYSVTVQPPGASP---VTISVFDKVRVRLQVEK 980 
ELU38692      249 VVEEAFVIRAFRNGLAVFVSKLGIEGLVTFKn-------eQE-FDSESYSVTLPGPSGT----AKVAVFDRVRVKIRVEQ 316 
ESK96454      907 VAEEAYVIRTFRNGVGVFVSKLGIEGLVTLKh-------nLHtFDADNYTITIGE--------KKIKIFDKVVVKIEVEK 971 
XP_007418523  901 VRAEAFVIRAFRNGLAVFVSQYGLEGLIKFKn-------eNE-YDADRYEITIPTRSEDKK--VIIGIFDRVMVEITTEQ 970 
EGU11041      930 VRAEAFVIRAFRNGLAVFVSQFGLEGLVTFKr-------dND-YDADSYEIHVPTPAGKS---VTIGVFDKVEVEISVEK 998 
XP_014570011  937 IREDAYVIRAFKNGVAVFVSKLGLEGLVTFKr-------eVK-YDPDRYELSVPTNTGA----VTIGVFDKVKVEITVEK 1004
XP_002175127  878 TREEAHVIKVFKNGFVVFIAKFGLEGIVYTRTLSTPEPV-VE-FDEAQYALNVSIKAPKQHk-IRIQMFQKVLVSVGAIR 954 
P37202        877 AEEDAYVIKVFKNGFVVFIARFGLEGIVYTKSLSSVLEPnVE-YVEDEYKLNIEIRDQPKPqtVQIQMFQQVRVRVTTVR 955  Schizosacchar...
XP_013021296  877 AEEDAYVIKVFKNGFVVFIAKFGLEGIVYTKSMTNMLEPnVE-FLEDKYMLKVEIRDPPKPkiVEVQMFQKVRVRVGTVR 955 
5C0W_J        991 DPITSKRKAEL 1001 Saccharomyces cerevisiae S288C
XP_002911164  981 DKNTQRGKVKM 991 
ELU38692      317 DKNTLRGKVKM 327 
ESK96454      972 DKNTQRGKVKM 982 
XP_007418523  971 DRFTQRGRVKM 981 
EGU11041      999 DKNTQRGKVVM 1009
XP_014570011 1005 DKNTRRGKVHM 1015
XP_002175127  955 DEHSGKQKVHI 965 
P37202        956 DEHSGKQKVQI 966  Schizosaccharomyces pombe 972h-
XP_013021296  956 DEHSGKQKVDI 966 
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