Conserved Protein Domain Family
GAPES3
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pfam17154: GAPES3 
Gammaproteobacterial periplasmic sensor domain
GAPES3 (GAmmaproteobacterial PEriplasmic Sensor) domain is a periplasmic sensor domain found in diguanylate cyclases/phosphodiesterases, including the c-di-GMP phosphodiesterases PdeK (YhjK) of Escherichia coli and HmsP of Yersinia pestis.
Links
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Statistics
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PSSM-Id: 496364
Aligned: 6 rows
Threshold Bit Score: 197.294
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q74QU7               36 QQRKDDYANQLESIAYSVRQPLSEAILSVDIPQAKKILNSLLPIGILSRAEVILPNQIQVLHANFPTERPIPHWAKRVFS 115 Yersinia...
Q7N9L7               40 QQRKDDYISQLNNAAVQVQAPLTEALLNSDLSKAKELLIGLRTVGILGRADVVLPEDIRVIRLSFATHRPIPELAKRVFG 119 Photorha...
1_pfamImport          1 QQRKDDYISQLNNAAVQIQTPLTEALLSSDLNEVKALLIGLKTSGILGRADIVLPGNVRVMSLDFATYRPIPELAKQVFG 80 
2_pfamImport          1 QQRKDDYINQLYNSSVQVRKPLADALLGSDLNAIKSTLITLRASGILGRAIVMTPENVQVISLDFATHRPIPGTAKMIFG 80 
Q6CYZ0               36 HQRREDYAKQLESIAYSVRQPLTDAVLQGEVQRAGNILDSLLPVAFLSRADVLLPDDFQTLHANFPEERPVPDWIARVFK 115 Pectobac...
goetting:EBL_c01520  25 QQNRYTVATQMESIARSVRAPLSAAILKADIPQAESILMQIPPSGIVGRADVVLPNQFQALHINFATEHPVPLLMARLFE 104

Q74QU7              116 LPVQITVPLYALERVPANPQPLAHLVLRADSFRMYQFILSA 156 Yersinia pestis
Q7N9L7              120 IPVEVSIPLHVYGSVSTDAKPLGHLILQVDSNRVYRFVINT 160 Photorhabdus laumondii subsp. laumondii
1_pfamImport         81 IPVEVNVPLYVYGVSPKTIESQGHLILQVDSNRVYRFALNT 121
2_pfamImport         81 IPVEIKVPLYAYGVAHTGKPPQGYLILQVDDNRIYRFAMNV 121
Q6CYZ0              116 LPIRISIPLYSPPQ-TQYSAPLAHLVLQADSYRMYQFIVST 155 Pectobacterium atrosepticum
goetting:EBL_c01520 105 LPVQISLPLYSLER-PANPQPLAYLVLQADSWRMYRHIISI 144
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