Conserved Protein Domain Family
RITA

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pfam17066: RITA 
RBPJ-interacting and tubulin associated protein
RITA is a highly conserved protein that binds to tubulin and shuttles between the cytoplasm and nucleus. It is responsible for export of RBP-J/CBF-1 from the nucleus, which modulates Notch-mediated transcription.
Statistics
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PSSM-Id: 465342
Aligned: 9 rows
Threshold Bit Score: 290.242
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_006005490   1 MMSVDLAITGIQASRLQHKGrsnyRVKSETSYVDETLFGSPSRPGRSVSGFDPPWTAASSqlliRSQP--C--------- 69 
1_pfamImport   1 KTPVELAVSGMQTLHLRHRC----RVKARPSYVDETLFGSPAGTRPAPPDFDPPWVEKVD----RTRG--V--------- 61 
4_pfamImport   1 KASAEL---GIAALQFQRQArg-pRVKAKASFVDETLFGSSAGRQVPAVEFDPPWAE--------STA--P--------- 57 
XP_005336893   2 KTPVELAISGMQTLHLQHRCrggyRVKAKASYVDETLFGSPVSPRPPPPDFDPPWVQKSD----STRGpiT--------- 68 
XP_004843801   2 KAPVQQSARGMQALHPQHRCrvgcRVKARASYVDETLFGSPVGTRPSVPGFDPPWVQKTN----GTRA--V--------- 66 
XP_004999622   2 KIPVEQAIRGMQALQLQHRCrggcRVKARASYVDETLFGSPVGTRPTLPDFDPPWVQKTN----GTRR--V--------- 66 
3_pfamImport   1 KTPVELAISGMQTLHRQHRCrggyQVKARASYVDETLFGSPSGTRPTPPDFDPPWVEKAN----RPKG--V--------- 65 
XP_006908638   2 KTPVELAISGMQTLHHPHRCrrgcQVKATASYVDETLFGSPAGTRPTPPDFDPPWVEKAS----RTKG--V--------- 66 
XP_007490073   6 KASVELTINGIQALQLQHKGrggyRVKSSTSFVDETLFGTPLGTRPALPEFDPPWAEKAW----PGKT--Vpltpnkkea 79  gray short-tail...
XP_006005490  70 --------------------QASPRElDTGLRTSPLPVPAKSSPPTCVPK-KK-KYRLKSHTPSYCDEMLFGSRQED-LG 126
1_pfamImport  62 --------------------GTGISR-ASAVNGSCETASSRGSTPTLTPR-RKnKYRLIGHTPSYCDESLFGSRPES-TS 118
4_pfamImport  58 --------------------S---PR-PLLWSPEVGASPAKGPPSAGTPR-KRnKYRLKSHTPSYCDETLFGPKPGE-QE 111
XP_005336893  69 --------------------RASPSQ-TSLSKGSCETTPSRSSTPTLTPK-KKnKYRVVRRSPSYCDESLFGSRP---AG 123
XP_004843801  67 --------------------GTRAIQ-SSPGKGSCETTPSGGSTPALTPG-KKnRYRLINHTPSYCDESLFGSQPKG-TS 123
XP_004999622  67 --------------------GAGGLQ-SSPGKGSCETTPSEGSTPTLTPRrRKnRYRLIGHTPSYCDESLFGCQPEG-VS 124
3_pfamImport  66 --------------------GREAPR-ASGANGSCETASSRGSTPTLTPR-KKnKYRLISHTPSYCDESLFGSRPVG-TC 122
XP_006908638  67 --------------------GTEASR-ASEANRSSKTTSSRGSTPTLTPR-KKnKYRLISHTPSYCDESLFGSRSKG-TS 123
XP_007490073  80 kwtldsypsrgsssihppsrG-------------------NNCISPRTPR-KKnKYRLIGHKSSYCDETLFGTQGKGgSP 139 gray short-tail...
XP_006005490 127 WEAPWTKKKEKVQLRPLLWTPPVSHKvhgqaTSHSSPPKGTPMKAVHPDTagpPSDSfspD---YKEKTDFWKRPRSDLD 203
1_pfamImport 119 REAPWTAKGHAAKVHALFWTPPATPR-----GSHSPRPRETPLRAVPPAG---PSKA---G---PGVAADSRKLSSNGLD 184
4_pfamImport 112 WAASWMSGSDVAKLCPLLLTPPSALRd---rLALSPRPKETPLRAVHQEK---GKEG---AgalRRREDAFRRPQESGSD 182
XP_005336893 124 PEASGMAKGDAAKLRALLWTPPATPR-----GGHSPRPRETPLRAIHPAG---PSKT---G---PGVAADTRELPSGGRG 189
XP_004843801 124 WEASRMAKGDTAKLHTLFWTPPATPR-----GRDSPRPREIPLRAVHPSG---SSMT---R---PQVAADSQGLSLDGPE 189
XP_004999622 125 WESSRLAKAGASKLHSLFWTPPATPR-----DSDSPCPRKAPLRAMHPEN---PSMT---R---PQGAASSPRLSLHSSD 190
3_pfamImport 123 WEAPWMVKGGASKLHTLFWTPPATPR-----G-HPPHPRETPVRTIHPSA---PTKT---E---PREGSEAGKVSKGGLD 187
XP_006908638 124 WEAPWMAKGDAAKLHTLFWTPPATPR-----GSHSPRPRETPLRAIHPTG---ASET---E---PKVATGSRKLSVDGLD 189
XP_007490073 140 RKVPWIKLEEIPRLEPLFWTPPSVPW-----DSCSPRPKETPLRAIHPMV---SSMP---K---NRSKSDIWHRPLERLD 205 gray short-tail...
XP_006005490 204 p-SRKSLSRERSHSLTRLSGGSGGPGAAgiTAITPRKDWAPcrRPSSAYATLTG-LGgdQHRPGSAGLSGTLSAGRPKTt 281
1_pfamImport 185 --PPRPLRRELAHSLAHLNVPSTGRPPA--GAPHANGPRDP--RPSPSGVTFRSpLV--TPRAHSVSVSVPAAPRRGGV- 255
4_pfamImport 183 rtNQADLRRRRSCSLTRLCSASDRAP------PLANNPRTS--TRQDRALLVPStGS--FARPCSQGFSVSTKATRSSD- 251
XP_005336893 190 --APHPPGRGRSQSLTHLNTPSAGFP------AHGEGPQAP--RPSTSGVTFRSpLV--TPRARSVSTSVPATPRQGGA- 256
XP_004843801 190 --VPRPLRRERSHSLTCLSVPSAGHPAS--SAPHTNGPQDP--RPPPAGMTFRSpLV--NPRAPSVSASVPATPRRGRG- 260
XP_004999622 191 --TPRPPRRERSHSLTCLSVPSSGHPAA--SAPHTNGLQDP--RPPPAGVTFQSpLV--TPRAHSVSASVPPTSRRGRA- 261
3_pfamImport 188 --SPRALN-----------VPSTGRPPT--GGSPTSGPRDP--RPSHPGA-FRSpLV--TPRARSVSASVPATSQRGGA- 246
XP_006908638 190 --SPHPLRQERSHSLTHLNVPSTGRPHT--SDPHTNGPGNP--RPSPSGVTFRSpLI--TPRAHSVSVSVPATPRRGGA- 260
XP_007490073 206 --SLGPLQKGYSQSLTHLNGSSTRHPLTt-NTPHQGRQREA--WVQSAVVTFRSpLVtpTPRARSISFSEPGTHQKYLA- 279 gray short-tail...
XP_006005490 282 gSIKIKPAWK 291
1_pfamImport 256 -AQKPKPPWK 264
4_pfamImport 252 -SCKPKPPWK 260
XP_005336893 257 -TQKPKPPWK 265
XP_004843801 261 -PQNPKPPWR 269
XP_004999622 262 -PQNPKPPWR 270
3_pfamImport 247 -TPRPKPPWK 255
XP_006908638 261 -TQKPKPPWK 269
XP_007490073 280 -APKPKPPWK 288 gray short-tailed opossum
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