2BGO


Conserved Protein Domain Family
CBM_35
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pfam16990: CBM_35 
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Carbohydrate binding module (family 35)
This is a mannan-specific carbohydrate binding domain, previously known as the X4 module. Unlike other carbohydrate binding modules, binding to substrate causes a conformational change.
Links
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Statistics
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PSSM-Id: 293595
Aligned: 6 rows
Threshold Bit Score: 151.911
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2BGO_A            3 VPEGNSWTYTAASASITAPA-QLVGnVGELQGAGSAVIWNVDVPVTGEYRINLTWSSPYSSKVNTLVMDGTA-LSYAFAE 80  
jgi:Clocel_4119  40 RYEAEKATLTGTEVKTGTIFsNGAG-VDGFDTAGDAVTFNVNVEQAGRYNITIGYATPYGQKNNTLVVNGSViSDCVFPA 118 
tigr:CJA_3470   199 VPEGNSWTYTAASASITAPA-QLVGnVGELQGAGSAVIWNVDVPVTGEYRINLTWSSPYSSKVNTLVMDGTA-LSYAFAE 276 
wugsc:KPN_03070 608 VYGVAEGRLTVMKSDKDALTvGEDGfLGPFANEGDKVSWQVQAPWSGQFLLNVTFNGKWGGKQNSFVVNGGApQTVAFPQ 687 
WP_010074133    763 VYEAEKGTLNGTAVATAMQGfSGTGyVTSFEDDTDNLAMNVNVAAAGTYNLIVRHSAPYGAKEYNVLVNGTAvATNKVAE 842  Clostridium...
WP_010074133    492 VFEAEKAVLSGLTVDNSNKGySGTGyVGNFGGATDNLSLNVTVDKGGEYSLIVRHSAPYGSKEYNVLVNGAVvATNKIQE 571  Clostridium...

2BGO_A           81 AT-VPVTYVQTKTLSAGNHSFGVRVgssDWGYMNVHSLKLEL 121 
jgi:Clocel_4119 119 SDtVKQLTVNNISLKAGANTIAIVN---SWGWMQVDYIDVQL 157 
tigr:CJA_3470   277 AT-VPVTYVQTKTLSAGNHSFGVRVgssDWGYMNVHSLKLEL 317 
wugsc:KPN_03070 688 TDeQGQQLRIPVTLKAGSNQIDFGRfagDWGYMFIKSIEVVA 729 
WP_010074133    843 STyFSDTTPIEIKLNAGDNTITIDR---GWGWFNVDLIMVKP 881  Clostridium cellulovorans
WP_010074133    572 SSlFTDSTAVTVKLTAGANTIKIDR---GWGWFNVDCLMLKP 610  Clostridium cellulovorans
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