2BGP


Conserved Protein Domain Family
CBM_35
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pfam16990: CBM_35 (This model is not part of the current CDD release)
Carbohydrate binding module (family 35)
This is a mannan-specific carbohydrate binding domain, previously known as the X4 module. Unlike other carbohydrate binding modules, binding to substrate causes a conformational change.
Links
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Statistics
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PSSM-Id: 522675
Aligned: 5 rows
Threshold Bit Score: 157.722
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2BGP_A         2 AVPEGNSWTYTAASASITAPA-QLVGNVGELQGAGSAVIWNVDVPVTGEYRINLTWSSPYSSKVNTLVMDGTA-LSYAFA 79  Cellvibrio japo...
2_pfamImport   1 TVYEAEKGTLNGTAVATAMQGfSGTGYVTSFEDDTDNLAMNVNVAAAGTYNLIVRHSAPYGAKEYNVLVNGTAvATNKVA 80 
1_pfamImport   1 TVFEAEKAVLSGLTVDNSNKGySGTGYVGNFGGATDNLSLNVTVDKGGEYSLIVRHSAPYGSKEYNVLVNGAVvATNKIQ 80 
3_pfamImport   1 VRYEAEKATLTGTEVKTGTIFsNGAG-VDGFDTAGDAVTFNVNVEQAGRYNITIGYATPYGQKNNTLVVNGSViSDCVFP 79 
WP_012489045 198 AVPEGNSWTYTAASASITAPA-QLVGNVGELQGAGSAVIWNVDVPVTGEYRINLTWSSPYSSKVNTLVMDGTA-LSYAFA 275 Cellvibrio japo...

2BGP_A        80 EAT-VPVTYVQTKTLSAGNHSFGVRV---GssdWGYMNVHSLKLELL 122 Cellvibrio japonicus
2_pfamImport  81 ESTyFSDTTPIEIKLNAGDNTITIDR---G---WGWFNVDLIMVKPV 121
1_pfamImport  81 ESSlFTDSTAVTVKLTAGANTIKIDR---G---WGWFNVDCLMLKPL 121
3_pfamImport  80 ASDtVKQLTVNNISLKAGANTIAIVN---S---WGWMQVDYIDVQLG 120
WP_012489045 276 EAT-VPVTYVQTKTLSAGNHSFGVRVgssD---WGYMNVHSLKLELL 318 Cellvibrio japonicus
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