Conserved Protein Domain Family
RcpC
?
pfam16976: RcpC 
Flp pilus assembly protein RcpC/CpaB
RcpC is a family of Gram-negative proteins expressed from the tight-adherence tad locus. RcpC is an auxillary protein that sits in the inner membrane and interacts with TadB and TadZ, an AAA ATPase. A recent study has identified two tandem beta-clip domains in RcpC95. beta-Clip domains are known to interact with carbohydrate moieties in other systems, such as SAF.
Links
?
Statistics
?
PSSM-Id: 496247
Aligned: 106 rows
Threshold Bit Score: 55.2768
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q6D931       117 GFVAAVLRKGMRAISVPTSAIASNAGLVSAGDRVDVILSmkrddqaelppSRNQPVVMPLLASQTIVRDLRVLALNDktg 196 Pectobacterium ...
WP_025435925 106 SYFSYNIPKNQRAVTLEVDSVAGVADLIRPGDYVDLITY-------------FGAKDPYNDVAKDMLQNVIVLAVDKdft 172 Peptoclostridiu...
WP_015402536 123 kdFSGTIQSGHRAITIQVDEVNSISGMIKPGNSIDLFTRms-------gkSFSNSSSGSREAIIPVLEDVLVLATDKia- 194 Desulfocapsa su...
WP_013536731 114 dQFSRLIPRGKVAYTLSVDENNSISGMIAPGDLIDILFLk---------dKDESSGARTGALALPLLQQVRVLATGTr-- 182 Pseudoxanthomon...
WP_245592840 111 QAFSQKIRTGRRAVTIPVDAINSVSGMLVPGDLIDLYVS---------------FEYRRKRITAPLLQGVLVLATGS--- 172 Advenella mimig...
WP_004298695 115 aTLSAQLAPGRRATTIPVDETSSLSGLLRPGDRIDLLAT---------------VQRDHHHLTLPLLQGVRVLATGS--- 176 Thauera
Q0KCZ7       126 rDFSDLLKPGKRAFTIEVDMVNSTAKMLKPGNHVDLFLIs---------sTSPTAAGTDKQTARLLMSDMLVLATGQdvr 196 Cupriavidus nec...
WP_012403632 125 RDFSDMLPAGQRALTFEIDAVNSTASMLRPGNRVDMYWVg----------TQAYASAGERKAVRLLLPGVLVLATGRs-- 192 Paraburkholderi...
WP_011758824 119 rQFSDLLQEGQRAVTIDINEENSTAGMLVPSDLVDLFLS-----------YTVENGDSERVKMELLIEKAQVLATGK--- 184 Shewanella amaz...
8_pfamImport   1 ---HYVIAANRVPYAIEVSPSDVIGGVISHGSMIDVVALslp-----dseLASNNSLRRTMSITPVLIGVKALQIKN--- 69 

Q6D931       197 tpiyprfdvaedgtvldatAKSRESAVRSRPTT--------YQT---VTLEVTPQQAEALAVAKELGMLHLALR 259 Pectobacterium atrose...
WP_025435925 173 -----------------igKEPIVAEGSEGNRR--------------ITVAVNVWDAEKIVFAQDYGKVHLVLR 215 Peptoclostridium acid...
WP_015402536 195 -----------------arPNEDEFKNLDSEDR--------RRAyntLTLEVTPKEAAIVAIAESRGELISILR 243 Desulfocapsa sulfexigens
WP_013536731 183 -------------------IGERVAPDGRPADD--------GQGfssVTLELDHGQAKTLAVASEAGSLRVLLR 229 Pseudoxanthomonas suw...
WP_245592840 173 --------------------DSRQTDAAEESGQ--------STAfstVTLDTAPEEAARLVAARQAGTITALLR 218 Advenella mimigardefo...
WP_004298695 177 -------------------RTRPGEDDGAGDLL--------GGSfgtLTLDLSEEEATRLVAARALARLTAVLR 223 Thauera
Q0KCZ7       197 prdy---------geamaaQAAEGAEGVDTNPD--------YDS---LTLMVSPEQAARLALAQKVGSLRAVLR 250 Cupriavidus necator H16
WP_012403632 193 -------------------VNARDAGDVDEPAS--------ASRydtVTMQVPAADAPRIVLAQKMGTLRLILR 239 Paraburkholderia phym...
WP_011758824 185 -------------------------RSIDVHPElvnsiydnPDSyntVTLALSTEDAIRVSLAKGRGKFVTLLR 233 Shewanella amazonensis
8_pfamImport  70 ---------------------PISTQSGDMDNS--------DIQkvsVILELTRKQVAKLTVAKRISEL----- 109
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap