Conserved Protein Domain Family
UPAR_LY6_2

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pfam16975: UPAR_LY6_2 (This model is not part of the current CDD release)
Ly6/PLAUR domain-containing protein 6, Lypd6
UPAR_LY6_2 is a family of higher eukaryotic proteins expressed in neurons. It modulates nicotinic acetylcholine receptors by selectively increasing Ca2+-influx through this ion channel. The family carries an LU protein domain - about 80 amino acids long characterised by a conserved pattern of 10 cysteine residues. The family is a positive feedback regulator of Wnt/beta-catenin signalling, eg for patterning of the mesoderm and neuroectoderm in zebrafish gastrulation, where Lypd6 is GPI-anchored to the plasma-membrane and interacts with the Wnt receptor Frizzled8 and the co-receptor Lrp6.
Statistics
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PSSM-Id: 522664
Aligned: 15 rows
Threshold Bit Score: 186.485
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001181696  40 TTPYPGGFKCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSISVTKRCVPLEECLSTGCRDSEHEGHKVCT 119
NP_001106503  40 TTPYPGGFKCFTCEKAADNYDCNRWAPDIFCPRETRYCYTQHIMNATGESVSVTKRCAALEHCLNSGCRDSINKDQKVCT 119
Q66IA6        40 TTPYPGGFKCFTCEDAPDNYECNRWAPDLYCPRESRYCYTHHKMSWDGNTVSVTKRCVPLEDCLQTGCSDIDHEGNRVCT 119 zebrafish
XP_006003864  40 TTPYPGGFKCFTCENASDNYECNRWAPDVYCPRGTKYCYTQHRMDSNGMSISVTKQCMSLEGCMSTGCSETKLEGHKVCT 119
XP_003440959  40 TTPYPGGFKCFTCQDAVDNYDCNRWAPDVYCPKDTKYCSTLHMMDRSGESVSVTKRCATMEECLFTGCADVADTGYQVCS 119
Q9D7F2        39 PTPFPNSFKCFTCENAGDNYNCNRWAEDKWCPQDTQYCLTVHHFTSHGRSTSITKKCASKNECHFVGCRHSRDSEHTECR 118 house mouse
XP_040560317  64 PTPFPNSFKCFTCDNAVDNYNCNRWAEDRWCPESTQYCLTVHLFTDHGKSTSVTKKCATGDECHFVGCHHHRESGHTECV 143
XP_046800124  64 PTPFPNSFKCFTCDNAVDNYNCNRWAEDRWCPESTQYCLTVHLFTDHGKSTSVTKKCATGDECHFVGCHHHRESGHTECV 143 chicken
XP_047299361 111 PTPFPNSFKCFTCENAGDNYNCNRWAEDKWCPQNTQYCLTVHHFTSHGRSTSITKKCASRSECHFVGCHHSRDSEHTECR 190 human
XP_046800129  40 TTPFPHGFKCFTCERAADNYECNRWAPDVYCPRGTRYCFSQHMMRVTGESVSVTKRCVPLEDCLSTGCTYVKHEEYKICT 119 chicken
NP_001181696 120 SCCEGNICNLPLPRNETDATFATTSP 145
NP_001106503 120 SCCEGNICNLPLPRNETDAIFATTSP 145
Q66IA6       120 ACCEGNICNLPLPRNETDAIFSTTSP 145 zebrafish
XP_006003864 120 SCCEGNICNLPLPWNASDAIFATISP 145
XP_003440959 120 SCCEGNICNVLVPRNDSSAIFSSISP 145
Q9D7F2       119 SCCEGMICNVELPTNHTNAVFAVMHA 144 house mouse
XP_040560317 144 SCCEGMICNVEIPTNHTNAVFAVLHA 169
XP_046800124 144 SCCEGMICNVEIPTNHTNAVFAVLHA 169 chicken
XP_047299361 191 SCCEGMICNVELPTNHTNAVFAVMHA 216 human
XP_046800129 120 SCCEGTICNLPLPRNASDAVFTTLSP 145 chicken
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