4ETX


Conserved Protein Domain Family
PelD_GGDEF

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pfam16963: PelD_GGDEF (This model is not part of the current CDD release)
PelD GGDEF domain
This degenerate GGDEF domain is found at the C-terminus of PelD, a membrane-bound c-di-GMP-specific receptor. It contains an RXXD motif resembling the allosteric inhibition site found in diguanylate cyclases. In PelD this RXXD motif binds to dimeric c-di-GMP.
Statistics
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PSSM-Id: 522660
Aligned: 15 rows
Threshold Bit Score: 105.114
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4ETX_A       167 AQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRlRNDEGRRVLLVLLPLTSAEGSQGYL 246 Pseudomonas aer...
Q9HZE7       321 AQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRlRNDEGRRVLLVLLPLTSAEGSQGYL 400 Pseudomonas aer...
WP_012471233 315 PTVFGAELVKMTRLRRDLDIVSTVVVINLQPGPRLDELCQVLERQQRGLDHGWR-RDLGWCVQFVTLMPFTGPAALEGYQ 393 Trichlorobacter...
Q39U78       337 PPNFAAELIKTVRLKRDLHVSSALVMVQVMADSRLDEICKTMERQQRGLDHSWL-RTTDWGAQFVTLMPFSGPASIEGYK 415 Geobacter metal...
WP_012404529 367 PHTFALDYARLVHLKRDTQVQSSIVALVFHNDEHGTTLFQHVLRTRRALDVQWP-LRDEHRLVVLTLMPLSGDSAVDGYL 445 Paraburkholderi...
2_pfamImport   4 PHRFALDYARLVHLRRDSGVLSAVVTLVFDSDERGAALCEHVVRTRRALDSQWE-IVGARRRAVLTLMPLSGTSGVDGYL 82 
WP_013236171 368 PPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQIRRLKRAADVVWT-YKAGGRNVLMTLLPLAGAAAVDGYL 446 Herbaspirillum ...
4_pfamImport   4 PVDFAVDFLQLRRLAGIVPQPGVCQSFVFRAGREAREIADKIQKLRRGLDVFWV-HEDGEYLRVLTLLPFAGTTAAEGQR 82 
Q0VR57       323 PFRIASELAALVRLREGGRVDTSLTLFVADESEQAGLILDALARGLRSLDLAWW----ISDRVLMIMMPMTGESSLEGYV 398 Alcanivorax bor...
3_pfamImport   4 PPLFAFELQRLAHIHRSTQVPSIVVALELQQRALEQDLPPQIERLKRELDEVWR-IEAPGRQVLAVLMPLGNATTAEGYI 82 
4ETX_A       247 QRLRilfAERFGQarELESLGVRIRQYELDAGNDRQALGHFLFN 290 Pseudomonas aeruginosa PAO1
Q9HZE7       401 QRLRilfAERFGQarELESLGVRIRQYELDAGNDRQALGHFLFN 444 Pseudomonas aeruginosa
WP_012471233 394 ARLNevlRKQFGM--TLQSVGITIKYAVLSGDEPLIQLANLLTE 435 Trichlorobacter lovleyi
Q39U78       416 SRIHeilQRQVGR--STGQEGITMHSTSVTTDDPLVQLVALLEE 457 Geobacter metallireducens GS-15
WP_012404529 446 LRIEenlHAQYGV--DFEAARVAVHSMAVPADEPIAELRRLLER 487 Paraburkholderia phymatum
2_pfamImport  83 MRIEdslRAQFGI--DFEGAHVAVYSMHVPAEEPMRPLVKLMEH 124
WP_013236171 447 MRVEaasQAQFGA--KSLANYAAIHTAAIGGDEPSRLLPNLVER 488 Herbaspirillum seropedicae
4_pfamImport  83 ARVEaelQRCCAG--LWQSAFLGADFMRIDARPAAEQLAHWL-- 122
Q0VR57       399 LRTEkwlQEEYVFm-SLRQAGIQFFYRHLDQRDPEVQIARLLEA 441 Alcanivorax borkumensis SK2
3_pfamImport  83 HRLEgwmQHKSQQ--SLAQAGIFPHVVQPDSAQPVRTVQRL--- 121
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