Conserved Protein Domain Family
VPS13_DH-like

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pfam16909: VPS13_DH-like (This model is not part of the current CDD release)
Vacuolar-sorting-associated 13 protein C-terminal
VPS13_C is a family of eukaryotic vacuolar sorting-associated 13 proteins that lies at the C-terminus of the members, The exact function of this domain is not known.
Statistics
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PSSM-Id: 496199
Aligned: 76 rows
Threshold Bit Score: 177.748
Created: 22-Aug-2024
Updated: 4-Feb-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002139115 3316 RIYIRKFRIYPLVIHLTFNLDPLKSFSLstekdgnnstlqinqalsssslnlshsleqFAHTFGlmLSSLIRSITTIEDA 3395
A0CT43       2846 KIYLKNLMLEPIDICFTLKSSPGHVMNS---------------------------------SSIgvIADLGLTLASIDSA 2892 Paramecium te...
XP_004039864  278 AIYIKQLNIQPINFCFTIKLDSQISNNQe-----------------------------fSFSPLsfLSEFGLQLISIDQA 328 
Q23PW6       4460 AIYIKNLSIQPINFCLTLNLAGADNALGsd----------------------------iFSVPLaiFQEFGLELVAIDQA 4511 Tetrahymena t...
XP_004032006  186 SLYIKQLNFQPIYFCLTLNMSDNKKKKQqv----------------------------sAFSPLliFSQLGLELVSIDQA 237 
XP_004036983 1944 AIYIKHLHFQPIDFCLTLNMSDNQQNYGs-----------------------------lKLSPLavFQQFGLELVSIDQA 1994
XP_020434800  996 KMYFENLSIEPISMYLTFDLSKQSGAFQs-----------------------------lEAPMVraFRRIGFVLVSFQQA 1046
Q55EI3       3381 KMYFESLDIEPISMFLTFDLSNKSGSIAsl----------------------------eQAPMVkaFRRIGFVIVSFQHA 3432 Dictyostelium...
XP_004361633 3150 MVYFEMLHINPLKVNLSFTSSKLPKEISavl------------------------garSLSELLlgIKSSSPFLN-IEHA 3204
XP_024516155 2750 KVYVEAFHIDPLELTVSFSSIPWLPKESrgva-----------------------aqsLLWVTGslVQRRLIALADVEGA 2806
XP_002139115 3396 PLWLNQFELdESSYLS--DIITKIKKHYEHELYNQLYVIATSLGSVGNPVNSFTNIGAGIGDLFYEPIYAVTSGrsEDGV 3473
A0CT43       2893 KIRLNAFKT-QHIFGSsnEIIGRISKHYKGQFLTQIYKLLGSFEIFGNPVSLISNLGTGVIDMFYEPIYALVTGksGYKV 2971 Paramecium te...
XP_004039864  329 NINLNALEQ-QHLFDTisSIKLRFKKHYGNQFIIELCKIFGYIDVIGNPVKLVNEITQSMSKMFYDPIKALAKGs-GKQA 406 
Q23PW6       4512 SISLNALNQ-QHLYDTfsSIQSRIQKHYISQFLTEIYKIFGSFEAIGNPVKLVKNISSSVSKMIYNPLKSLQQGr-GAQA 4589 Tetrahymena t...
XP_004032006  238 NIKLNALNQ-SFLYNTpeNINARITKHYTTQFIQEIYKILGSFEVIGNPVKLLNEITINIRNLILEPLKALTQGe-GRQA 315 
XP_004036983 1995 NIKLNALNQ-SHLYDTpqNIQTRIFKHYTTQFMIELYKIFGSFQAIGNPVKLVNEITSSVSKMIYDPLKALTKGn-GKQA 2072
XP_020434800 1047 HIFLNSFKL-THAFGTndELLNPLFRHYLSEGLSEVYKILGTFNFLGNPIGLFKNFGVGFKDFFVSTGKGIVG----SDF 1121
Q55EI3       3433 HIFLHGFSL-SHAFGSneELLAPIFNHYFSEGLSEVYKILGAFNLFGNPVGLVTNFGIGFKEFFVSMGKGLVG----NSF 3507 Dictyostelium...
XP_004361633 3205 PIKFNGFIW-EHPFLSikQVTDEITLHFSYQMMGQIHKIFGSFDAIGNPIRLAESLGSGFKDFFHEPAMGIVKS--PQDF 3281
XP_024516155 2807 PIRLRHLTL-AHPMANwnSILGIIQRHYTRQLLHELYKVLGSADVFGNPMSFLRSLGSGVWDFVHAPATSIRQN--PGQI 2883
XP_002139115 3474 VTGVKRGIESFMNHSVFGAFQAISKMAGTASQIAGVLTMDEKYIE 3518
A0CT43       2972 GEKFFTGAVTLIHTSITGVYKTVNTIIGTIMKILDQMTLDKKYMS 3016 Paramecium tetraurelia
XP_004039864  407 FEHFATGAAFLVYNSISHIYDIAKKISGLFMKILARMTFHKQYLQ 451 
Q23PW6       4590 VGDLATGAISLVQNSISSIYKAARNISGFIMRVISKITFHKQYLQ 4634 Tetrahymena thermophila SB210
XP_004032006  316 IGKIAQGIFTLIKNTLYSLYQTFKSITGLFTRILVKLTFHKKYQQ 360 
XP_004036983 2073 IGDFAQGALTLVQNTIQSVYKTIKNITGFFARIIVKMTFHKRYQQ 2117
XP_020434800 1122 RSGVSSGSKSLAKHTVYGLFDSGTKFSSSAAKALSTLSMDQQYIL 1166
Q55EI3       3508 TDSFGQGSKSLAKHSVYGIFDSGAKLTGSAGKVLSTLSMDQRYIL 3552 Dictyostelium discoideum
XP_004361633 3282 ALGVSKGTSSLVNNSVFGIMDSASKITGTIGKGLVHLSLDDQYIR 3326
XP_024516155 2884 VQGVTVGTRSLFRNTVFAFSNAATQMSKAARKGMAALALDQDYMN 2928
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