3L4K


Conserved Protein Domain Family
TOPRIM_C

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pfam16898: TOPRIM_C (This model is not part of the current CDD release)
C-terminal associated domain of TOPRIM
TOPRIM_C is found as the C-terminal extension of the TOPRIM domain, pfam01751 in metazoa.
Statistics
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PSSM-Id: 522630
Aligned: 137 rows
Threshold Bit Score: 106.842
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3L4K_A        139 FITPIIKVSi----tKptkNTIAFYNMPDY------EKWREEE---SHKF--------TWKQKYYKGLGTSLAQEVREYF 197  brewer's yeast
EFX84376      145 FVIPIVKATkgigelAe--S-LTFYSLDEF------EQWKTQT---ENWR--------HYHIKHYKGLETLRKEEVKECF 204 
EFX83266      118 ELLNVQEASrk--------ecVRFYSLLEY------EEWKSDT---ENWQ--------HYRIKHYQGLGSMTSEEMESVF 172 
XP_002292612  577 FITPLLKATkkgkkkD----SISFFSVAEY------NSWRESLedeDEIS--------KWTVKYYKGLGTSTPTEAKDYF 638 
XP_002181225  571 FVTPLLKASkkssktG----TLSFYSMAEY------KKWRGSIe-aEDFK--------KWTVKYYKGLGTSTPAEAREYF 631 
5_pfamImport    1 FRTPLLKAQrg-------eDVKSFFSITEY------QKWAETV---ENLE--------KWKIKYYKGLGTSTSNEARQYF 56  
XP_045096397  592 FRTPLLKAKkg-------nEVVPFFSLNEY------RKWAETI---E--G--------KWKVKYYKGLGTSTSNEAREYF 645 
NP_001368211  592 FRTPLLKAKkg-------dKVRSFFSMNEY------RKWADV----EEGG--------KWKIKYYKGLGTSTSNEAREYF 646 
Q9SKH1         45 LVTPYVKVS------------RLTFSSHKYfivltnLSYVTSTlntRNGKmkdrnylnRWTIKFYKGVWVQVMRE-KNVL 111  thale cress
EFH45917      524 FITPLVKATqhgthrI-----ERIYSNPAY------NNWSKTI----EHD--------KWSIDYYKGLGTCTYEEACEYL 580 
3L4K_A        198 SNLDRHLKIFHSLQG-NDK--DYIDLAFSKKKADDRKEW-LRQYEP-----------GT-VL--D-PTL----K-EIPIS 253  brewer's yeast
EFX84376      205 SNLQRHQIDFRHGGD-DDD--RAISMAFNNKHLEEWRYR-LNVWKNackdlrqlgfsGDlYA----KDI----K-EVSYH 271 
EFX83266      173 TNLPSHRVIFKHNGD-DDD--RAISMAFSKRHSGQHRDW-LDFWNKaskwlrespypKL-HL--YrRET----R-HVSFY 240 
XP_002292612  639 LSFVRHYRPFKWQSEkNDG--ERIDMAFEKDRANDRKDWiLTEYDE-----------KS-AVtvDeRDG----N-SITYG 699 
XP_002181225  632 SAFNDHFRPFLWNSD-IDG--ELLDMVFDGERAADRRAWiLDVYDE-----------TS-NLlnDpSAG----N-NVSYE 691 
5_pfamImport   57 RDFGKHVVNFQYKDA-SDD--EAIRMAFDREKTEERKSW-IQSLGTl-----------------NgSNElaeeKqQMSYK 115 
XP_045096397  646 RNLDHHTVNFNYAGS-SDD--DAIRMAFDREKSDERKRW-IRGSDEvstt-------------------edveKtELNYE 702 
NP_001368211  647 SDLDHHTVNFKYTGT-TDD--DAIRMAFDRDKSDERKEW-IRRSENeitn-------------------eddgKtEISYQ 703 
Q9SKH1        112 SNVDQNKRFFIW----DEGseAALENAFGTSE-DKQKKW-IEKYVP-----------GT-FL--DsKKQ------QIMYS 165  thale cress
EFH45917      581 AHIDNHTKEFFWAGD-NDG--RSIDVAFKTEDIAAKKIW-LEEMPK---------------VyiGrLNR------RMSYG 635 
3L4K_A        254 DFINKELILFSLADN 268  brewer's yeast
EFX84376      272 DFVKKDLIRFRNMEY 286 
EFX83266      241 EFVHRGLVHYTNMEH 255 
XP_002292612  700 DFVDNELIHFSNANN 714 
XP_002181225  692 DFINKEMIHFSNADN 706 
5_pfamImport  116 EFVDGELMQFGMADL 130 
XP_045096397  703 EFVNSQLMQFGMADL 717 
NP_001368211  704 EFVDGQLMQFGMVDL 718 
Q9SKH1        166 DFVTKKLKLYFTTSN 180  thale cress
EFH45917      636 SFINEELIFAAQAIL 650 
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