6WM3,5BN3


Conserved Protein Domain Family
ATP-synt_ab_Xtn

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pfam16886: ATP-synt_ab_Xtn (This model is not part of the current CDD release)
ATPsynthase alpha/beta subunit barrel-sandwich domain
This barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel-sandwich domain the C-terminal strand is circularly permuted and occupies the spatial position of the N-terminal strand in other hybrid domains.
Statistics
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PSSM-Id: 522624
Aligned: 329 rows
Threshold Bit Score: 70.9188
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6WM3_C        124 VSALSRDIKWDFTPckNLRVGSHITGGDIYGIVSENSLiKHKIMLPPRNRGT---VTYIAPPGNYDTSDVVLELEFEGv- 199 human
30_pfamImport   1 TYPLDKDKKWHFKP--IAKPGDKVGASAWLGEVEENYQ-PLKIMAPIAMEGMa-tVKSIVPEGDYLCEDTIAVLTGEDge 76 
CDA78299      108 TYPLDKEKKWHFKP--IAKVGDEVSASAWLGEVDENHQ-TLKIMVPFQLTGTl-rIKSIAAEGDYTIEDTIAVLTNKDge 183
7_pfamImport    1 TYPLDKERVWHFVP--LVNVGDEVGPSAWLGQVDENFQ-PLKIMVPFQLTGTy-kVKSIVPEGDYTIEDTVVVLTDREgk 76 
WP_006744244  108 TYPLDKESLWEFKP--LAKVGDTVIAASWLGEVLENFQ-RLKIMAPFRLEGEy-kVKSIVSEGQYKIDKIIAVLTNEAgd 183 Bacteroides sp.
WP_014224010  108 TYPLNDERLWDFKP--LAHTGDTVEAGSWLGEVDENSQ-PHRIMVPFTFEGKy-kVKSVVPEGQYRVTHTIAVVTDEAgq 183 Tannerella for...
Q7MTX7        108 TPALDDDKLWDFKP--LANVNDNVIAGSWLGEVTENFQ-PHKIMVPFVFEGNy-kVKSLAKAGSYKVNDVIAVVTDQDgk 183 Porphyromonas ...
CDE60379      108 TFPLDENKKWAFKP--LAQAGEKAIAGTWLGEVDENSQ-PHKIMVPFTFKGEy-tIKSVAAEGEYTINDTIAVLTDTEgn 183
WP_014804648  112 VDPLDTEVLFDFSP--LVAAGAQVEAGDWLGQVNEGWI-KHKIMVPFALEGVh-tVKSLVSAGKYRVDDEIAELTNSSge 187 Turneriella parva
CCZ63721      112 LDPIP-DRAWEFTP--SVKIGDAVEAGDIIGSVPEGLF-THEIMVPFTLKGHdwkVKSIKEKGSYHVRATICIIENGDge 187
6WM3_C        200 KEKFTMVQVWPVR 212 human
30_pfamImport  77 DIAVTMVQKWPVK 89 
CDA78299      184 DVKVNMIQKWPVK 196
7_pfamImport   77 DIPVNMIQKWPVK 89 
WP_006744244  184 EVNVSMIQRWPVK 196 Bacteroides sp.
WP_014224010  184 DHDVTMIQKWPVK 196 Tannerella forsythia
Q7MTX7        184 DHNVTMVQKWPVK 196 Porphyromonas gingivalis
CDE60379      184 EVKVTMVQKWPVK 196
WP_014804648  188 TVKVTMRQKWPVK 200 Turneriella parva
CCZ63721      188 EKELSMVISQPIK 200
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