6QX9


Conserved Protein Domain Family
SF3A2

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pfam16835: SF3A2 (This model is not part of the current CDD release)
Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
SF3A2 is one of the components of the SF3a splicing factor complex of the mature U2 snRNP (small nuclear ribonucleoprotein particle). In yeast, SF3a shows a bifurcated assembly structure of three subunits, Prp9 (subunit 3), Prp11 (subunit 2) and Prp21 (subunit 1). with Prp21 wrapping around Prp11.
Statistics
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PSSM-Id: 522593
Aligned: 82 rows
Threshold Bit Score: 80.6533
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6QX9_A2      112 IGRPGYKVTKQRDSEMGQQSLLFQIDYP---------EIAEg--iM-------PRHRFMSAYEqrIE-PPDRRWQYLLMA 172 human
XP_001646284 140 GICPECKVCKIKDEESGLVGLAVEVNYQik------nDLLEieedTiy----qPFIRIVSGIE--LShDSEKDKKYLVIA 207
Q6FNA7       140 GLVPTCHSTEVIDEK-GNKGIAVMLEFEesd---ktaDVLNad---------rPYARIVSGLE--LNtSAQKDKRFLVVA 204 [Candida] glabrata
Q07350       133 GTIPVCKIATVKNPKNGSVGLAIQVNYSse------vKENSvdsdDkak--vpPLIRIVSGLE--LSdTKQKGKKFLVIA 202 Saccharomyces c...
XP_056086634 133 GVVPVSKVATVKDPKTGSVGLAVQVNYNie------tKKNDidesGkid--ilPLIRIISGLE--LSdAKQKGKKFLVIA 202
XP_004181156 140 GIVPIVKLINVKDAQ-DRFGFAIQVDYSqkvd-teeaGVINtnqnFp------PMVRIISNLEm-KNtSKKQDKKYLVIS 210
XP_003957944 135 GIIPNCEIVSVKHPKTGLDGIAVKVDYSie------kAAQYdnsnEfpdidypPFIRIVSGLE--LSsEDDKDKKFLVIA 206
XP_002552600 134 GIVPNYQVAKVRDPTTNSRGIAMRVIYTnp-----epSEDGgd---------rPYVRIMSSLE---FtREESDKKYLIIA 196
Q6CJ05       132 GIKPEVKVVKVRHPEKELFGIAVKVRYGke------qQIHSaekdEf-----iPYLRIVSDFE--LDkPDPKNVKYLVVA 198 Kluyveromyces l...
XP_003678227 132 GVVPSCKVVDVKDPETDNVGIAIQVNYAqesmdkkedVITEddtdRtel--fsPFIRIVSGLE--LAsKEAQDKKFLVIA 207
6QX9_A2      173 AEPYETIAFKVPsRE-I------------------DKAeGKFWTHWNRETKQF 206 human
XP_001646284 208 YEPFENTGIEIP-NKeVlmdsks------kevitvENF-NEKCSYWDKDSKKL 252
Q6FNA7       205 YEPYQNVAIEIPnDReIvmngyqpq---sdeeifvDTL-NRQCTFWIENQRQF 253 [Candida] glabrata
Q07350       203 YEPFENIAIELP-PNeIlfsenndm---dnnndgvDEL-NKKCTFWDAISKLY 250 Saccharomyces cerevisiae S288C
XP_056086634 203 YEPFENIAIELP-PNeIifgeneem---dtdkdglDEL-NRKCTFWDAVSKMY 250
XP_004181156 211 YQPFENISIEIPsDKdIflpykhqpegnykidaaiDSL-NESCTFWNVNSKVL 262
XP_003957944 207 YEPFDKIGIEIP-NKeIimqnegy-----mqensvDEL-NSTCTYWDEESKLF 252
XP_002552600 197 FEPFKAIAIEIP-NEeIltnsaafn---tsgaksvDDF-NSKFTYWDEDNQTL 244
Q6CJ05       199 FEPFENVGIQIP-SDeIelndydp-----sdslalDEL-NRKCTYWDQDNGDF 244 Kluyveromyces lactis
XP_003678227 208 YEPFANIAVEIP-NKeVvfgtkegtv-nnnsknsvDEI-NGKCTYWDKDSKLF 257
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