3ZTH


Conserved Protein Domain Family
Cas_St_Csn2

?
pfam16813: Cas_St_Csn2 (This model is not part of the current CDD release)
CRISPR-associated protein Csn2 subfamily St
Cas_St_Csn2 is a family of Csn2 CRISPR-associated (Cas) proteins found in Firmicutes, largely Streptococcus and Enterococcus. CRISPR-associated (Cas) proteins are the main executioners of the process whereby prokaryotes acquire immunity against foreign genetic material. Cas allow short segments of this DNA, called spacer, to become incorporated into chromosomal loci as clustered regularly interspaced short palindromic repeats or CRISPRs; the resulting encoded RNAs are then processed into small fragments that guide the silencing of the invading genetic elements. Thus Cas are involved in the acquisition of new spacers. This family of St_Csn2 is longer than the canonical Csn2, pfam09711 through the addition of a large C-terminal domain. The central domain present in both families appears to be a channel that selectively interacts with dsDNA.
Statistics
?
PSSM-Id: 522586
Aligned: 3 rows
Threshold Bit Score: 421.705
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3ZTH_A    11 ERIELNIGAITQIVGQNNELKYYTWQILSWYFGGKKYSSEDlsifDYEEPTILDEArEIVKRSSYHYIDISSFKDLLEQX 90  Streptococcus therm...
CDA88219   6 NEFEIDILPFVQLCGMNCKKKEFIINSIEKHFSSGKYKDYE----KEYQECFLVDG-QILGRNYFKTYSIQNREDIIRYI 80 
Q5M539    11 ERIELNIGAITQIVGQNNELKYYTWQILSWYFGGKKYSSEDlsifDYEEPTILDEArEIVKRSSYHYIDISSFKDLLEQM 90  Streptococcus therm...
3ZTH_A    91 EYKKGTLAQGYLRKIVNQVDIVGHLEKINEQVELIEEAXNRHINLNCGQVEYHLENLplTLDQLLTKnfSPFFAIENKNL 170 Streptococcus therm...
CDA88219  81 QISKSSIMMQYFSNCLTEYNCAQDMSVIGEHLENIFQNINESFLENGSKVKLSFEEN--NIFNLIQN--AKVESYDGQDI 156
Q5M539    91 EYKKGTLAQGYLRKIVNQVDIVGHLEKINEQVELIEEAMNRHINLNCGQVEYHLENLplTLDQLLTKnfSPFFAIENKNL 170 Streptococcus therm...
3ZTH_A   171 sfEWVSNIDKLSLFLEXLDHLLSQTTEKYLIVLKNIDGFISEESYTIFYRQICHLVKKYPnLTFILFPSDQGYLKIDEEN 250 Streptococcus therm...
CDA88219 157 --HLLNNLELLTEFLQLIEKNLLYQPGKILLIFKNIDHLLEWQEYQLFVDKVEKISNGFD-ISIICTLSIEGYVDIRKQF 233
Q5M539   171 sfEWVSNIDKLSLFLEMLDHLLSQTTEKYLIVLKNIDGFISEESYTIFYRQICHLVKKYPnLTFILFPSDQGYLKIDEEN 250 Streptococcus therm...
3ZTH_A   251 SRFVNILSDQVEHLYDVEFXYERVXKYYPSNDFPTREGFRXSLETVTPYLLTKxlrQPSLSLVDSVILNILNQLFHFSYR 330 Streptococcus therm...
CDA88219 234 FEGIHIINDVVYQMPELERVKEFVQDHYPSGRIVSEKDVQNFCKKIMHKIGCD---RYKLITRENVYLKLLNDSLVLRQK 310
Q5M539   251 SRFVNILSDQVEHLYDVEFMYERVMKYYPSNDFPTREGFRMSLETVTPYLLTKmlrQPSLSLVDSVILNILNQLFHFSYR 330 Streptococcus therm...
3ZTH_A   331 IRcsqTPDKELLQKF 345 Streptococcus thermophilus LMG 18311
CDA88219 311 ES---ENLDKMELDF 322
Q5M539   331 IRcsqTPDKELLQKF 345 Streptococcus thermophilus LMG 18311
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap