Conserved Protein Domain Family
PALB2_WD40

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pfam16756: PALB2_WD40 
Partner and localizer of BRCA2 WD40 domain
This domain is found at the C-terminus of partner and localizer of BRCA2 (PALB2). It is a seven-bladed WD40-type beta-propeller. It binds to the N-terminus of BRCA2.
Statistics
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PSSM-Id: 496091
Aligned: 4 rows
Threshold Bit Score: 637.668
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_004945321  984 QKNTEAEqLTPvllDGLREENLQFISKLKDSSGSCAVDVSSVWWGAAGYRELCVVTACESSVSLWKPQAPDHWEKVYTWQ 1063
XP_023353382  847 QTKVRGD-PVEiwhDTLELGNLQLVSKLKNPSNSCSVDVSTVWWEVTGCKESCIITACEFTVSLWKFLDNWQWRKVHTWH 925 
ELK12100      861 QQPGIADiPAC---DSVVPGDLQLVSRLKDPSAPCAVDVSALWWDVAGLKEPCIVTACEYAVSLWKPLDTWQWEKIYSWH 937 
XP_005998537  936 SPTCQGH-------SDTNEETLKLISTLKNHSHSCGVDLCSVWWDIDGRRRLNIVIACENSVSLWESLQENQWENTHTWD 1008 coelacanth
XP_004945321 1064 LGEIPVIQIIPVPDTCNLVCIALGNLEIGEIRLLLYSSENDSFKQSLVKSGNIKAVLGLRDGKLISSSRAMQEQQVEIVS 1143
XP_023353382  926 FTEIPVLQIIPLWDACNLVCVALGHLEIREIRLLFSSAEDECLKQSLVKSGNIKAVLGLRHKRLVCSNGTLHDHQVDLMT 1005
ELK12100      938 FTEVPVLQIVPVPDVCDLVCVALGNLEIQEIRALLCPSDGESGKQVLLSSGHIQAVLGLTKRRLASSRGTLCDQQVEVMT 1017
XP_005998537 1009 FTEVPVIQIVSIPEAINLICVALGKLEIGEIRTLFYSREEGTFRQSLLRSGDMKIVLGLTDRRVVSCNSGYRKQNVELIS 1088 coelacanth
XP_004945321 1144 LSETGRCKDRQTLMPPEETVLAFAEVEGVRDALVGTTAVNSVVVWNLKTGQLLKKMHIGYSYPASICHRAYSDSGLLFVV 1223
XP_023353382 1006 FSGSGRSKEKQTLMSPEETILAFAEVQGMQDALLGTTLMSNIVIWNLKTGQLLKKMQIGNAYQASICHKAYSDMGLLFVV 1085
ELK12100     1018 FAEDGGSKEKRFLMPPEETILTFVEVQGMQDALLSTTVTNSIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFVV 1097
XP_005998537 1089 LSEEGRNEGTLTLMSPGESILAFAEVDGEKDALIATTDLYNIVLWNIKTGQLLQSISIGNSYPTSLCLKAFSDSGLLFAI 1168 coelacanth
XP_004945321 1224 LSHPHAKESELCGNPAFRVIAFNPKTARSTGVMFSSLPPGHTGR--YLEGEVKDAWAAAVLTSGAIAVWDLLLGCCTALL 1301
XP_023353382 1086 LSHPHGKEIESMGNPIFRLIVINPKTALSVDVRPYSLPQGHTGR--FLDGDVKDNLAAAVLTSGTIAVWDLFLGHCRALL 1163
ELK12100     1098 LSHPCAKESEPSGSPVFQLIAINPKTTLNVGVMLYCLPRGQTGRqvFLEGDVRDSSAAAVLTSGTVAVWNLLLGHC-AVL 1176
XP_005998537 1169 LCNQHNNKSESSLDSVLKLVAINPKKGHNSQVLAYTLPAGFRGQ--YLDGDVSGQTVAAVLTSGAIVLWDLLYGHCTAQL 1246 coelacanth
XP_004945321 1302 PPGSDSRWTLVRWSAAGAGLLAGRADGSVCVYR 1334
XP_023353382 1164 LPNSDGNWSFVKWSGTDSCLLAGQKNGSVFVYS 1196
ELK12100     1177 PPVSGQSWSFVKWSGTHSHLLAGRKDGSIFVYL 1209
XP_005998537 1247 APETDESWSLVRWANLDSCLLAGQKDGHVLIYE 1279 coelacanth
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