4AQN


Conserved Protein Domain Family
Pesticin

?
pfam16754: Pesticin (This model is not part of the current CDD release)
Bacterial toxin homologue of phage lysozyme, C-term
This the C-terminal activator domain of pesticin, a hydrolase enzyme secreted by Yersinia pestis and other Gammaproteobacteria to kill related bacteria occupying the same ecological niche. It is referred to as a bacteriocin and it leads to the hydrolyzis of peptidoglycan. Its immunity protein is Pim. Pesticin carries an elongated N-terminal translocation domain, an intermediate receptor binding domain, and a C-terminal activity domain with structural analogy to lysozyme homologues. The full-length protein is toxic to bacteria when taken up to the target site via the outer or the inner membrane. The receptor domain is necessary for the close contact with the outer membrane; the N-terminal is a type of translocational, TonB box; the C-terminal domain is the death-delivering domain.
Statistics
?
PSSM-Id: 522549
Aligned: 6 rows
Threshold Bit Score: 229.746
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4AQN_A        166 IVDHDIFSSNgfEGFN-PTSHFPSNPSSdyfnSTGVTFGSGVDLGQRSKQDLLndgVPQYIADRLDGYYMLRGKEAYDKV 244  Yersinia pestis
WP_015224676  730 QIDIDFISNE--EGGQqTEGYIPDAPGN----MSGVTIGTGVDLGGLDIDELD---IPDNLKDKLRPYEGKQGEEAEEFL 800  Halothece sp....
Q12KY5          5 NIDFDFIHNL--EGFSl-KGYVPDPTIS----KSGVTVASGFDIGQCSKDEITs-hFPAELADKLLPYVGKTKQDALDCL 76   Shewanella de...
Q57159        166 IVDHDIFSSNgfEGFNp-TSHFPSNPSSdyfnSTGVTFGSGVDLGQRSKQDLLndgVPQYIADRLDGYYMLRGKEAYDKV 244  Yersinia pestis
XP_002675382  230 KIDKGLLTVN--EGKPaTTGYVPQSKAGtvigKSGVTVGTGFDVGQQNVKGLKalgLSPSLVDKLSPYTGLKQQAAKDFL 307 
XP_002675482  252 KIDKGLLTKN--EAFS-TKGYVPQSKSGtvvgKSGVTVGTGFDIGQQNVKGLKslgLSPSLVDKLSPYTGLKQQAAKNFL 328 
4AQN_A        245 RTAPLTLSDNEAHLLSNIYIDKFSHKIEGLFNDa-----NIGLRFSDLPLRTRTALVSIGYQKGfKLSRTAPTVWNKVIA 319  Yersinia pestis
WP_015224676  801 NENPLSINEQEADTLDRAVKDEIFSDLQRRYNQ------NSDIPFNQLPPEAQTVIADVATQYGpNLENRTPNFWNEVTE 874  Halothece sp....
Q12KY5         77 SDTPLKITEQDAVEIDKYTKAAAVDRLCHLWQKa-----NPKQPFDALPTPCATIIASVAFQYG-NLAKRTPNFWRQVTQ 150  Shewanella de...
Q57159        245 RTAPLTLSDNEAHLLSNIYIDKFSHKIEGLFNDa-----NIGLRFSDLPLRTRTALVSIGYQKGfKLSRTAPTVWNKVIA 319  Yersinia pestis
XP_002675382  308 AKNPLSLSPAEVASIDKAVMDKFSANLAKDYAAaaaknpTAVKNFKDLPAPVQSVAYSVYHQYG-SFSK-TPSFMNKLAT 385 
XP_002675482  329 SKNPLSLSPAEAKAIDKAVMDKSLASLAKDYEAaaaknpNAVKNFKDLPSSVQSVAYSVQHQYG-SIKKATPGFFGQLTK 407 
4AQN_A        320 KDWN 323  Yersinia pestis
WP_015224676  875 QRWE 878  Halothece sp. PCC 7418
Q12KY5        151 GQWQ 154  Shewanella denitrificans OS217
Q57159        320 KDWN 323  Yersinia pestis
XP_002675382  386 NDYN 389 
XP_002675482  408 NDYK 411 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap