3VEP


Conserved Protein Domain Family
RsdA_SigD_bd

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pfam16751: RsdA_SigD_bd 
Anti-sigma-D factor RsdA to sigma factor binding region
RsdA_SigD_bd is a domain at the N-terminus of anti-sigma-D factor RsdA proteins. It binds to the -35 promoter binding domain of sigma-D. The complex formed regulates the transcriptional expression of the bacterium.
Statistics
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PSSM-Id: 496086
Aligned: 15 rows
Threshold Bit Score: 52.3312
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3VEP_X        13 PLDELARTDLLLDALAEREEVDFADPRDDALAALLGQWRDDLRWPP 58  Mycobacterium tuberculosis
WP_013808816  14 DISDLLHDDAFLDALSQGSVVDTATDDERELAALLLQWRDDVVAAP 59  Hoyosella subflava
1_pfamImport   1 DLRQVHFDDAFIDALSHDVPTPTRDDTEYQLAALLSGWRHEVLSEP 46 
WP_012833552  43 DLSQVAFDDRFLDALSRDVPVETRDDGEYELAALLSGWRHGALDAP 88  Gordonia bronchialis
WP_003893005  15 SLNEINRTDRFIEALSLEQPVYSTDPEEAELAFLLAGWRDDVRQAP 60  Mycolicibacterium smegmatis
WP_013677392 159 DLLAVQSDDALLDALARGHSGGGGGGDDDRIAEMLAAWKAEVDAEP 204 Pseudonocardia dioxanivorans
WP_013125578  60 DVAAVRRDDELIEALASGGAVSTSDHSEFALASLLADWRDEIVTTP 105 Tsukamurella paurometabola
WP_014349225  36 DIAAVRRDDALIDAIASDGPVQTDSTEEFQLAALLADWRAEIVAPP 81  Nocardia cyriacigeorgica
WP_005518493  24 DVAAVRRDDALIDAISAEGPVATDSPEEYQVAALLSNWRAEILAQP 69  Prescottella equi
WP_025347352  42 DIAAVRRDDALIDAIAGDGPVATDSAEEYQLASLLANWRSDIVDAP 87  Nocardia nova
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