4EHS


Conserved Protein Domain Family
DnaGprimase_HBD
?
pfam16730: DnaGprimase_HBD (This model is not part of the current CDD release)
DnaG-primase C-terminal, helicase-binding domain
DnaG-primase_C is the C-terminal of a set of eubacterial DnaG primases that are a single-stranded DNA (ssDNA)-dependent RNA polymerase responsible for the synthesis of oligonucleotide primers needed for the replication of DNA. It interacts with helicase at the replication fork.
Links
?
Statistics
?
PSSM-Id: 522529
Aligned: 14 rows
Threshold Bit Score: 130.436
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
4EHS_A        31 EFLEKLVIRYLLEDRSLLDLAVGYIHSGVFLHKKQEFDALCQEKLDDPKLVALLLDANL-PLK-KGGFEKELRLLILRYF 108 Helicobacter py...
WP_002956015 426 EIAESVLVKTLLEKPRWIDFTLEYIDISLFAYKREEFAKLLQQEVEHPLLIAIAINEKIkPLNdLPSLKEHLRLFIIQAY 505 Helicobacter ci...
WP_013023219 449 sQLEELIIRYILETPSLLDLALQYIDAEIFQHQKQAFCALLAKNLDHPSLIGIRINPKLiTTP--HGFRNELRLLILRYN 526 Helicobacter mu...
P56064       443 EFLEKLVIRYLLEDRSLLDLAVGYIHSGVFLHKKQEFDALCQEKLDDPKLVALLLDANLpLKK--GGFEKELRLLILRYF 520 Helicobacter py...
WP_006655785 433 DLAEKAIIKSVLEDMNLLEFVMDFLEPTMFFSQKEAYLKLLKGELEDPSLIRILLDNKVkAQD-KEKLKQQMIMILYQYY 511 Helicobacter ca...
Q30UM7       429 DMWELTLIKTVLEHPEFIDQILDVLDPSLLKFHSSELSLALRGEFSHPQLMAIAVDEQIkALNsEDALRAELVSFLMKHY 508 Sulfurimonas de...
WP_013325841 435 DMWELALIKTILEKPEYIEQVLDVIDPSLLQFHSYEFSLVLQGKQDAPEVMAIMVDDTItSLKdEEALNAELITFLTKYY 514 Sulfurimonas au...
BAF69326     435 DPKELSIIKTMLTKPHTVDIILDIIDASHFTYHQEEFELTLQNRVDHPKIRSILLNEDIlVFE-EEHIRSELLVFLIKYY 513
1_pfamImport   1 DIAELCIIKSILEKPERLDSVLDIVDISMFEYHKTEFELLL-NDIKDSSLNAIVLNEKLeNYD-DERLNQELLVLLHKFY 78 
WP_013136155 426 DIGELCIIKAILNDKNRLSSVLDIIDASMFDYHKNEFEILL-TNIDDERLNSVLLNERLeDYD-DERLNAELLILLGKFY 503 Arcobacter nitr...

4EHS_A       109 ERQLKEIPK-SSLPFSEKXICLKKARQAIXKLKQGELVA 146 Helicobacter pylori 26695
WP_002956015 506 TQFLSQIPRfEAMSLQEKGTLIKEVKTKILQLKKGELLP 544 Helicobacter cinaedi
WP_013023219 527 TSLLNSIQKeRALSFEQKSFRIRKIKNHILKLKQGELIA 565 Helicobacter mustelae
P56064       521 ERQLKEIPK-SSLPFSEKMICLKKARQAIMKLKQGELVA 558 Helicobacter pylori 26695
WP_006655785 512 EEQKQKVINeKQLSLREKSFLIRKYQKYLDNLKKGDLIV 550 Helicobacter canadensis
Q30UM7       509 EREYKKVNVlSDITFEEKAFYIRKFKGKIELLKRGELVA 547 Sulfurimonas denitrificans DSM 1251
WP_013325841 515 ERELKKVNIaSNISFEEKAFYIRKFRGKIAKLKRGELVT 553 Sulfurimonas autotrophica
BAF69326     514 EQKIQEVVK-GDFPFNQKSFLIRKYKENIKRLKEGELIi 551
1_pfamImport  79 TNKLMAISYdKELDFKQKANMIRKIKDNIYQLKQGKLVS 117
WP_013136155 504 SNKLNEVLYdKNYTFNEKSSLIRKIRDNISMLKKGKLIT 542 Arcobacter nitrofigilis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap