8SH0,4HIM


Conserved Protein Domain Family
POT1PC

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pfam16686: POT1PC (This model is not part of the current CDD release)
ssDNA-binding domain of telomere protection protein
POT1PC is the ssDNA-binding domain on a family of fungal telomere protection protein 1 proteins. POT1PC is able to accommodate heterogeneous ssDNA ligands. Pot1 proteins are the proteins responsible for binding to and protecting the 3' single-stranded DNA (ssDNA) overhang at most eukaryotic telomeres.
Statistics
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PSSM-Id: 522494
Aligned: 90 rows
Threshold Bit Score: 72.6884
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8SH0_A       154 LCDVQ-PMQYFDLTCQLLGKAE-VDGASFLLKVWDGTRTPF--PSWRVLIQDLVLEGDL---------------SHIHRL 214 human
EJW82044     189 LNELV-LGGYSDLVVQAISLFI-DDRNSVVLRCWDTTLPSKk-IFMFNDDMITEVICQD---------------EKMEMI 250
XP_020305079 199 LNEFF-LGGYNDITVQAIALFI-DDRNNVILRCWDTTSPPRkiFVLNPEFINKVIYRDG---------------KMEMTA 261
EGT59944      23 TYYLQ-WRRYMDLIAQVHSVVL-TQRGTYVLKCWRGTKFGP--ANKAMEVESRLFRVNQdcfkeyivspdpriaNAVEKL 98 
EGT54172      23 NYYLE-WMRYMDLIAQVHSIVL-TQKNMYVLRCWRGDKFGP--RNRALEVESNLFRVTQnyfkqyiappdarigRAVENL 98 
EGT56753      23 TYYLQ-WCRYMDLIAQVHSIVL-TQRDVYVLRCWRGTKFGP--SNRASGVESRLFRVRQeyfkqyiappdprigRAIEKM 98 
XP_053590879  19 TYYSL-SHVYTSLVAQVHSVVV-TQKGFQYLRVWRARCFGP--AKFSEEREERIFRITQeifksylvppdprigKAIEYF 94 
EFO84754      19 KNYIR-FKNYFDLIAQVHSVVE-TKRGFKYLRVWRTMQLGV--SESEKSNENTMFYVTPeifksyivkpdsrigHAVEHY 94 
2_pfamImport   2 TFYIN-YLRYFDVLGQLHSVAE-TKYGTWMLRLWRATQFGP--EKYERCREEGMFRVRQdyfhryiippdphiaKAINVY 77 
EDO47031     354 ISGLDpSTQFVNLACQVLALWKdPALNFLVLQVWDGTTPRY--GCDVEVDDHSRWVMDR---------------KISEQA 416
8SH0_A       215 QN-LTIDILVYDNHVHVARS-LKVGSFLRIYSLHT----K---LQS-MnsenqtmlSLEFHLHggtsygrgirvl----- 279 human
EJW82044     251 PMdYWCDIVLYEEHANFARNsVKCGDVLLLINTHL--------YHS-Ks-------GVALVMHnggqsynrsivil---- 310
XP_020305079 262 VN-YWCDIVLYEEHGDFARNnVKCGDILLLINIHL--------YHS-Ln-------GAAFAMHggrrynrsiiil----- 319
EGT59944      99 GReCLLEIVVYDEHISVLDS-VKSGDFVALQNVHG--------YVN-Gs------lVHTLTIHggdgmgrnrgitii-pk 161
EGT54172      99 GKeCLMEIVVYDEHIASLTG-IKSGDFVALKNVHGnvnvR---LPH----------SHTLSMHrgdgdgrnrgisvipnd 164
EGT56753      99 GTeCLMEIVVYDEHVSSLNG-IKSGDFVALKNVHG--------YVN-Ft------lAHTLTLHrgdgdgrnrgisii-pk 161
XP_053590879  95 GKeYLLEIAVYDNHQEVIKT-VNSGDFILLSNVHI---------GS-Ke------kAITLSIHgggfasynreitpi-pt 156
EFO84754      95 GKhYLLEIAVYGNHQNVLQT-LNSGDFVVVKNIHA----T---QKSvYgn-----lTTTLDLHedgtrfnrgiylvp--n 159
2_pfamImport  78 GYnHLMEIEIYDEHRDYLEA-LRSGEYITVTNVHY----S---KGK-Vg--------dSLKLHggslynrgifkvp---d 137
EDO47031     417 GG-MAIPVCLYDEHSTGPAAdLNPGDFVMLANVRL----KevdNEE-Ngk-----pRVECMMHsdcingrgvymlkd--t 483
8SH0_A       280 pesnsdvdqlkkDLESANLT 299 human
EJW82044     311 dansklkrdllrNIDEFNIQ 330
XP_020305079 320 ddnnklkldllrNIDEFNAK 339
EGT59944     162 dynqpeflyfkaRIDAVLHS 181
EGT54172     165 frgernlnllreKIKWRLGN 184
EGT56753     162 dfnqhefiifkeKINDILAE 181
XP_053590879 157 dfsdpkmrlfrkRCRRMLEQ 176
EFO84754     160 ncndpqfrlyqkTCRRMLEL 179
2_pfamImport 138 dcsdhrflevkrRIENALDQ 157
EDO47031     484 gwtdwylqklkdSIQNYLDT 503
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