Conserved Protein Domain Family
Apocytochr_F_N

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pfam16639: Apocytochr_F_N 
Apocytochrome F, N-terminal
This is the N-terminal domain of cytochrome f. It is a soluble lumen-side domain.
Statistics
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PSSM-Id: 495991
Aligned: 24 rows
Threshold Bit Score: 225.273
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_023171572  27 PAFA-AAYPEARDASGKIVCSNCHLGLKQTEVEFPQSVEPGQVFNLKVKVPWDPKVQEVGADGSPAVVQLGAYIQLPKGF 105 Gloeobacter kil...
YP_003289264  33 PIYAqQGYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGNGQLSGLNVGAVVILPEGF 112
A0T0C9        32 PVFAqQNYSNPRAANGKLACANCHLNQKAIEIEAPQAVLPNSIFEVEIKVPYDTTKQQLGANGKKADLNVGGILMLPEGF 111 Phaeodactylum t...
EFJ05026      15 PISAqQGYENPREATGRTVCANRHSAKKPVDIEVPQPVPPDTAPEAVVRIPYDARVKQVLANGKKGAPNAGAVPIPPEGS 94 
P56771        37 PIFAqQNYENPREATGRIVCANCHLANKPVDIEVPQTVLPDTVFEAVVKIPYDMQLKQVLANGKKGALNVGAVLILPEGF 116 thale cress
YP_004347807  44 PIFAqQNYENPREANGRIVCANCHLAEKPVEIEIPQAVLPDTVFEAVVKIPYDKQIKQVLGNGKKGGLNVGAVLILPEGF 123
Q0P3K3        26 PMYAqQGYENPREATGRIVCANCHLAQKPVDIEVPQAVLPDSVFEAVVKIPYNQEVKQVLGNGKKGGLNVGAVLILPDGF 105 Ostreococcus tauri
Q2JL40        26 PYYAqMAYDNPREATGKIVCANCHLNAMPTRAEVPQAVTPGQVFTIKVGIPYDLSKQQVLADGSKGGLNVGAVVVLPEGF 105 Synechococcus s...
Q31NV8        43 PFWAqENYASPREATGKIVCANCHLAKKPTEVEVPHSVLPDTVFKAVVKIPYDRSSQQVLGDGSKGGLNVGAVLMLPDGF 122 Synechococcus e...
A5GMW2        29 PFWAqQNYDSPREATGKIVCANCHLAQKLTQAEVPQSVLPDSVFKAVVKIPYDTSVPEIGADGSEVPLQVGAVVMLPDGF 108 Synechococcus s...
WP_023171572 106 NLAPEKEWDKEAKEAMEKypavqLYADKPEKlkEHPTTYIINQIGSDQvkDQEFIVPIKAPDPNakgvsKEERVNFGKYS 185 Gloeobacter kil...
YP_003289264 113 KLAPNNLISKEIKEKSKG-----VFISPYSA--TQENILVVGPIAGDT--HQEIIFPVLSPDPA-----TNKKINFLKYP 178
A0T0C9       112 KLAPKNQIPAEVKEKNKG-----VFISPYSS--EFDNILVVGPIAGKT--HQELIFPVMAPDPE-----KNSDIKYLTYP 177 Phaeodactylum t...
EFJ05026      95 KLAPPERITTEIRERVGN-----LFFQAHRP--NKTNILVIGPVPGAK--HSEIASPILPPDPA-----TEEGAHLLKYP 160
P56771       117 ELAPPDRISPEMKEKIGN-----LSFQNYRP--NKKNILVIGPVPGQK--YSEITFPILAPDPA-----TNKDVHFLKYP 182 thale cress
YP_004347807 124 ELAPPDRIPEEMKAKVGK-----LYFQPYSA--EQKNIYVVGPVPGKK--YSEMVFPILSPDPT-----KNKSVSYLKYP 189
Q0P3K3       106 TMAPADRMSAELKEKVGK-----LYFQPYSE--DKQNILIVGPVPGKK--YSEMTFPLLSPDPA-----TNKKVNYLTYP 171 Ostreococcus tauri
Q2JL40       106 RLATEAEMTEEQRQETAE-----TYITPYSD--AKPNILLVGPLPGEQ--HQEIVFPVVAPDPK-----EDPSVAFMKYR 171 Synechococcus s...
Q31NV8       123 KLAPEDRISEELKEEIGN-----VYFTNYSA--DQENIILVGPLPGDD--HQEIVFPVLSPDPA-----KDKNVFFGKYQ 188 Synechococcus e...
A5GMW2       109 TLAPQDRWTDDIKEETEG-----VYFSEYSD--DQPNVILVGPIPGDQ--HQEIVFPVLSPDPA-----TDSNIHFGKYS 174 Synechococcus s...
WP_023171572 186 LYVGANRG 193 Gloeobacter kilaueensis
YP_003289264 179 IYVGANRG 186
A0T0C9       178 FYAGGNRG 185 Phaeodactylum tricornutum CCAP 1055/1
EFJ05026     161 IYVGGNRG 168
P56771       183 IYVGGNRG 190 thale cress
YP_004347807 190 IYVGGNRG 197
Q0P3K3       172 IYLGGNRG 179 Ostreococcus tauri
Q2JL40       172 VYIGANRG 179 Synechococcus sp. JA-2-3B'a(2-13)
Q31NV8       189 IHVGGNRG 196 Synechococcus elongatus PCC 7942 = FACHB-805
A5GMW2       175 IHVGGNRG 182 Synechococcus sp. WH 7803
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