Conserved Protein Domain Family
zf-C2H2_assoc

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pfam16606: zf-C2H2_assoc 
Unstructured conserved, between two C2H2-type zinc-fingers
This domain is found on a set of eukaryotic Zinc finger protein 536 transcriptional regulator proteins sandwiched between zf-C2H2, pfam00096 and zf-H2C2_2 pfam13465. It is not conserved between other pairs of the zinc-fingers on these sequences. It is natively unstructured, and its function is not known. The proteins recognise and bind 2 copies of the core DNA sequence 5'-CCCCCA-3'.
Statistics
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PSSM-Id: 495963
Aligned: 5 rows
Threshold Bit Score: 88.1166
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_051689323  664 RKSDEDGL-HAGLEERRGSGSDQESQSVSRSTTPGSSNITEESGVGGGLSQTGSAQEDSPHPSSPSSSDMGEEAGRPTGV 742 
XP_003225480  657 RKAEDEII-QASIEERRGSGSDQESQSVSRSTTPGSSNITEESGMGGGLSQTGSAQEDSPHPSSPSSSDVGDEVGRSAGI 735 
2_pfamImport    1 RKQGEEGI-HGCLDERRGSASDPESQSISRSTTPGSSNITEESGAGGGLSQTGSAQEDSPHPSSPSSVDAGEEVAKPMGV 79  
XP_014325595  695 RRGLDEAL-HQGVDERRGSASDPESQSISRSTTPGSSNVTEESGAGGGQSQTGSIQDDSPHPSSPSS-DAGEDLAKAAVS 772 
XP_029701839  695 RRNLEEAFqQQGLDERRGSASDPESQSISRSTTPGSSNVTEESGAGGGHSQTGSVQDDSPHPSSPSS-DLGDDVAKVSGA 773  torafugu
XP_051689323  743 qQ 744 
XP_003225480  736 -Q 736 
2_pfamImport   80 qQ 81  
XP_014325595  773 lQ 774 
XP_029701839  774 aP 775  torafugu
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