Conserved Protein Domain Family
Caskin1-CID

?
pfam16600: Caskin1-CID 
Caskin1 CASK-interaction domain
The Caskin1 protein interacts with the CASK protein via this region.CASK and Caskin1 are synaptic scaffolding proteins. The binding motif on human Caskin1 is EEIWVLRK. A similar motif is found on protein MINT1 and protein TIAM1, both shown to be able to bind to CASK though the motif. MINT1 and TIAM1 are not part of this family. This region is predicted to be natively unstructured.
Statistics
?
PSSM-Id: 495959
Aligned: 5 rows
Threshold Bit Score: 42.3661
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_011475521  463 VLRKPLA-GGERS--GSTGSLGSVRSSSSLQSSGNthvlttpapsphpapttglnthglNAPGLHAQSEGVKLLATVLSQ 539 
3_pfamImport    1 VYKKTPA-GGDRSsvGSSGSVASARSSGSGQSAGG------------------------SVHALHAQAEGVKLLATVLSQ 55  
2_pfamImport    5 VLRKPVA-GGDRSsvGSSGSVTSVRSSGSGQSATN------------------------AAHILHAQAEGVKLLATVLSQ 59  
1_pfamImport    5 VLRKSGApAGDRSsvGSTGSVGSTRSAGSGQSS--------------------------------TGGDGPRVWSTCIRS 52  
XP_003790846  377 VLRKPFA-GGDRSssSSVSSVAGGRGSGG--------------------------------HALHAGSEGVKLLATVLSQ 423 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap