Conserved Protein Domain Family
PTN13_u3

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pfam16599: PTN13_u3 (This model is not part of the current CDD release)
Unstructured linker region on PTN13 protein between PDZ
This natively unstructured region lies between the first two PDZ domains on long eukaryotic tyrosine-protein phosphatase non-receptor type 13 proteins. The function is not known. However, since each of the PDZ domains binds with a different protein it is likely to be a linker region allowing flexibility between the PDZs.
Statistics
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PSSM-Id: 522429
Aligned: 15 rows
Threshold Bit Score: 167.67
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_023493531 1179 QPKEKISKVp-sTPVHVANGMKNYMKKPSYLQDIALDSSSEDHCW-PHGTPRHISENSFG------LSGGLREGSLSSQD 1250
7_pfamImport    1 QPKERLYKE---STSTFQLKNQSRARSPGQRQKQDDESSSEEHNR-APSCSRPASGGSAT------VSLSRQNGSMSSQD 70  
6_pfamImport    1 QPKERLYQD---------------KRKDINLPEREVDPSSEEHHG-TVSPVLPLQGAGIPts---aFSPARQLSSLGSQD 61  
3_pfamImport    1 QPKESLYKKs--SPSHVQAKSAGKALISSQRRDLDFDTLSEERVG-TGSVSTQLSTSSLI----------HQPPSLGSQD 67  
5_pfamImport    1 QPKERLYREaasGYEAIQAKASVDTFDSDQDGEISVDDLSDEHGR-IESPSPPPHSSDAAas---sLSPVHQQSS--VPD 74  
1_pfamImport    1 QPKERLFPE--------------------------------EQTA-SPSPSPPPFASSSKngishaMPMGQWQESLSSQD 47  
2_pfamImport    1 QPKEGLTKVs-pS---LLNGMKGYLKRPSLIPDHETESSSEEHNQ-LLSHQKSTSGNVSG------LCSSKWDGSLSSQD 69  
XP_030127693 1181 QPKDKLSKAs-sNTAHTSNGARGYLRRPSSVQDNEAESSSEEHSR-CRGHQRPASRSLSG------LSGGKQDGSVSSQD 1252
XP_028932506 1184 QPRDKVSKAs-sPPAHLSNGSKSFPKRLLSLQNNDPESSSEEKHRpPNSHQRPLLGTSTG------LVTGKREGSLSSQD 1256
XP_031797926 1183 KPKEKISKAp-sTPTYLSNRIKNYVPRPSSIKDNDLESSLEDHHQ-TQCYQRRISLCSSA------LSGGQKEGSLSSQD 1254
XP_023493531 1251 SRTES-ASLSQSQVN-GFFAS--HVGDRTWQESQHGSPSPSViskatEKKR-TSTDSNRSKAKKPGISDATDYSDRGDSD 1325
7_pfamImport   71 SRTES-ASLSQTIIN-GFHKK--QVPDGAAPLPSCHPENAVT-----SDTPaPALPPKTWKGRIPEIVKDQYDSDRGDSD 141 
6_pfamImport   62 SRTSSsAKVNQPPRD-RVQQAl-ERVKAAASSETATESRGPEpkvelNQSP-PALPPKTRRVKLSVVPPVSEQSDRGDTD 138 
3_pfamImport   68 SKPSSgAKCVERLTGt------tTIADRPRPEPNAVLHRAPPa---lDPAA-PALPPKTRKAKVSEAPKVSEHSDWGDSD 137 
5_pfamImport   75 PKTNA----VKTKPN-GVQQCl-DRILATAATSSTGQPHKPAahrslDPVP-PALPPKTRRAKFSEAPKAPEHPDRGDSD 147 
1_pfamImport   48 SKSDQ-SSLALLHVN-GFHQKlpEEILAAQSSPNEHEQTA-------DVTP-PALPPKTRKTKSPEVPLELEHSDRGDSD 117 
2_pfamImport   70 SRTES-ASLSQSQTNgGFLGN--HINVQAQQEFQHCNNSQLSllkckERNG-SSLEVNLIKAKKNGIQETTEYSDRGDSD 145 
XP_030127693 1253 SWTES-ASLSQSQAA-SFFGK--RASGRAQQDAQHCSESQAGaskaiEKRR-SSSDSTRAKMKRPGVVEPVEYSDRGDSD 1327
XP_028932506 1257 SRTES-ASLAQSQAN-GFFAG--HVGDRGLAEVPHGSPSPSIiskasEKKR-TSTDCSRGKAKKAGLAEAMDYSDRGDSD 1331
XP_031797926 1255 SRTES-ANLSQSHLN-GFLVN--HLGAPAQQEFQHSSPSSLAvskpaEKKQ-TSNEHNQSKAKKLGISETVDYSDRGDSD 1329
XP_023493531 1326 VDEATYSSSQDHQ--TPKKESSSs-------mNTSNKMNFKSFPSSPPKPGDIF 1370
7_pfamImport  142 MDEDTCSSSQEKQ--MSKGLSPS---------SSMEKLSGNAQGVNDLKPGDLF 184 
6_pfamImport  139 MDEETYSSSQEKV--KAKKE------------NIMENLNDNAPGVNSLRPGDLF 178 
3_pfamImport  138 MDEETYSSSQEKV--KVRKE------------YNMENVNGNVPEVNSLCPGELF 177 
5_pfamImport  148 MDEENHCNSQGKH--VPACRNSPrcpvlclqeIIMERFSGNAPG-----PGDLF 194 
1_pfamImport  118 MDEDTYSSSQEKP----KKEILPh--------SVTDSLSGSGPEVNSLQPGDLF 159 
2_pfamImport  146 MDEATYSGSQEQAaaAAKKEPSFl--------NLANSMHSKKFSTPPLKPGDIF 191 
XP_030127693 1328 MDEATYSGSQEQQ--PAKKDSSSs--------NTANKVNSKKVSTTLLKPGDIF 1371
XP_028932506 1332 MDEATYSSSQEHR--ATKKDSASm--------NTANKMNYKKFSATPLKPGDIF 1375
XP_031797926 1330 MDEATYSSSQDHQ---TKKEPSSm--------STSTKMNLKKNSSAPPKPGDIF 1372
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