5XCC


Conserved Protein Domain Family
GramPos_pilinBB

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pfam16569: GramPos_pilinBB (This model is not part of the current CDD release)
Gram-positive pilin backbone subunit 2, Cna-B-like domain
GramPos_pilinBB is one of the major backbone units of Gram-positive pili, such as those from S.pneumoniae. There are three major pilin subunits that form the polymeric backbone of the pilin from S. pneumoniae, constructed of three transthyretin-like, CnaB, domains along with a crucial N-terminal domain, D1. The three Cna-B like domains are stabilised by internal Lys-Asn isopeptdie bonds, Gram-positive pili are formed from a single chain of covalently linked subunit proteins (pilins), usually comprising an adhesin at the distal tip, a major pilin that forms the polymer shaft and a minor pilin that mediates cell wall anchoring at the base.
Statistics
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PSSM-Id: 522411
Aligned: 8 rows
Threshold Bit Score: 112.151
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5XCC_A       186 IGDVVKYEVKASIPvyqKN-AQNIM--Y--KF--T--DTMSKGLTYD--EKTGFKVTSGDkvFAK-DTD-YTVD--V--- 247 Clostridium per...
CDB87925     199 IGDSVNYKITSRVP---NM-KGYTK--Y--FF--VmeDTLSKGLTYN--EDMVITIGAKT--LVK-DTD-YPLTvtK--- 259
Q8DYR6       250 IGKVVPYEVKTKIH---KG-SKYEN--L--VW--T--DIMSNGLTMG--STVSLKASGTTetFAK-DTD-YELS--I--- 308 Streptococcus a...
2_pfamImport   1 IGDNVPFQLTGTVDa--KY-DKYGS--YyyAF--H--DTMSDGLTFNa-DSVTVTVDGTA---VT-T-G-YEVV--T--- 59 
1_pfamImport   1 IDEVIPYKLTGTLP---SNyAEYETyfY--EF--N--DIMSAGLTFDk-MSVKVTVDGTT---LTaDQD-YSLI--V--- 61 
WP_021845080 220 VGDEVTFRLKAIVPdypED-ATYRK--F--VV--S--DKLGTGFDYSgdETIKVFRDEAGqqVIG-NEN-YTIA--Etpe 286 Blautia hydroge...
CCX90931     187 VGETVNYTITGKVP---DT-MGFET--Y--TYeiA--DTMSEGLTFNr-NSLAVKVGSAD---VTaDTDkCTIA--Y--- 247
Q8XP10       198 IGDVVKYEVKASIPvyqKN-AQNIM--Y--KF--T--DTMSKGLTYD--EKTGFKVTSGDkvFAK-DTD-YTVD--V--- 259 Clostridium per...
5XCC_A       248 K--KQEDG-STVItinFVY-ENIKAYAETGITLNYQATLNKDAVI-S-NkenlG----NTNNIQLDYTNNP 308 Clostridium perfringens ...
CDB87925     260 N--ADGTTsLEIV---FKNfIQYKGQTDAAITLTYSATLNQDAVL-D-P----Tt--gNPNTVKLIYSNNP 317
Q8DYR6       309 D--ARGFT-LKFTadgLGKlEKAAKTADIEFTLTYSATVNGQAII-D-N----P----ESNDIKLSYGNKP 366 Streptococcus agalactiae...
2_pfamImport  60 EdlDDGCT-FEVRfadLKNiK--AVKAGSKVVVNYTAKLNENAVIgE-G----G----NTNVSKLEYSNNP 118
1_pfamImport  62 H--SDTNS-FQVRfenLKAiQSVMITSTSQIVVEYKCRLNGNAVI-AgN----G----NPNTAYLVYSNNP 120
WP_021845080 287 K--ERTFQ-INFEdafIT------ENAGQTIYITYRAVVNDEAFT-V-D----E----LKNDAFLGYNNDP 338 Blautia hydrogenotrophica
CCX90931     248 D--AETAP-NTFKvtiLVKnC----TVGDAITVTYTATVNEKAIA---V----V----SKNEAKLTYSNDP 300
Q8XP10       260 K--KQEDG-STVItinFVY-ENIKAYAETGITLNYQATLNKDAVI-S-N----KenlgNTNNIQLDYTNNP 320 Clostridium perfringens
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