4FTF


Conserved Protein Domain Family
T2SSS_2

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pfam16549: T2SSS_2 
Type II secretion system (T2SS) pilotin, S protein
T2S_S is the S protein or pilotin of the bacterial Gram-negative secretion system in Vibrio and some E.coli and Shigella. It is given the suffix _2 to distinguish it from the PulS_OutS family of pilotins from Klebsiella and Dickeya, etc. AspS is functionally equivalent and yet structurally unrelated to the pilotins found in Klebsiella and other bacteria. AspS binds to a specific targeting sequence in the Vibrio-type secretins, enhancing the kinetics of secretin assembly; homologues of AspS are found in all species of Vibrio as well those few strains of Escherichia and Shigella that have acquired a Vibrio-type T2SS. PulS is the Kelbsiella pilotin, found in PulS_OutS, pfam09691. Not all species with a type II secretion system have this pilotin or S protein.
Statistics
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PSSM-Id: 495920
Aligned: 10 rows
Threshold Bit Score: 134.834
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4FTF_A         6 KQRNLELLAGNRASLLSTELPL-EFGPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDVG 84  Vibrio cholerae...
WP_021709133  23 KQRQLELMASNRAGVLSAGLPL-EYGPLKILRVSSRKNAVEMMMIYNDTAKGAKPLKQVLNTSIYSYCKSSEVLEQLDMG 101 Vibrio azureus
1_pfamImport   1 KQSQIELIAQHRASVLSAGLPL-EFGALNVMKASSKGGVVEILMLYNQDQ-GKIAPQELMHNAVRYYCSSNEVKTNLEQG 78 
Q5E629        22 QQQEIEMLADYRASVLASVLPL-EMGQLTLLQAKAKQGVVEMMFL--DGGNGEISTNQIIENSITTFCKDKEVRPVLDKG 98  Aliivibrio fisc...
WP_046075419  23 QHDQAAEAATQRADMIAQLLPM-DIEGYSLVRARAQDVIIELTLL-E--KNAKKAPGQLFSGLERRYCEDNDIRNMLDSG 98  Salinivibrio sp...
WP_047883310  22 KDQAVFDLAKSRAMAINSKAPYaKIDQYQIMKAQAREKNVEITILYGGGGKT--PPTMAAQNAAASYCNSSELSPLVSEG 99  Photobacterium
WP_009602772  27 KQKYLEMVAKNRASLLASELPL-ESGPLSIMRANSKGNIIEIMMVYNDDAKGAKPTASLLAQSVNTYCSNKDTKANLDLG 105 Vibrio caribbea...
Q9KRD9        57 KQRNLELLAGNRASLLSTELPL-EFGPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDVG 135 Vibrio cholerae
WP_053393953  26 KEKHLALLADSRAGMLSGELPL-ESGPLSIMRATAKGSTIELMMVYNQDAKGAKPIAEVFKGSVQSYCTSKDTKNNLEAG 104 Vibrio nereis
Q87NA2        23 NQRQLELMASNRAGVLSAGLPL-EYGPLQIMRVSSNKNVVEMMMIYNDDALGAKPLNQVLNTSIYTYCNTPSVREQIDMG 101 Vibrio parahaem...
4FTF_A        85 ISYRIQMRNTRGQLMADQLVTKESC 109 Vibrio cholerae 569B
WP_021709133 102 LVYRIKIRNSRGQLMTDELISAQTC 126 Vibrio azureus
1_pfamImport  79 VRYRLMLRNARGQLIVDQAVGIETC 103
Q5E629        99 VTYRYIIRNSRGQKQNDIIVNEQSC 123 Aliivibrio fischeri ES114
WP_046075419  99 ISYTILVRDTRGRQVLKNAIDATGC 123 Salinivibrio sp. KP-1
WP_047883310 100 VSYTIVIMDMRGRPMVTQPITAAIC 124 Photobacterium
WP_009602772 106 IHYRIKIRNSRGQLMSDELVTSQKC 130 Vibrio caribbeanicus
Q9KRD9       136 ISYRIQMRNTRGQLMADQLVTKESC 160 Vibrio cholerae
WP_053393953 105 LSYRIKMRNTRGQLLVDELITQKNC 129 Vibrio nereis
Q87NA2       102 LMYRLKVRNSRGQLIADELVSEQTC 126 Vibrio parahaemolyticus
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