Conserved Protein Domain Family
RisS_PPD

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pfam16524: RisS_PPD (This model is not part of the current CDD release)
Periplasmic domain of Sensor histidine kinase RisS
RisS_PPD is the periplasmic domain of the sensor histidine kinase RisS. It is purported to be the region of the kinase that senses the pH of the environs.
Statistics
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PSSM-Id: 522377
Aligned: 23 rows
Threshold Bit Score: 143.942
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012346922  71 VQAAQQIASLVNLSRAALRYTDQVNRVSLVKNIAEQEAVKLQPREPGDKWEPFEVDR-FTRTIGAELRSRLGPQTVVAST 149 Leptothrix chol...
2_pfamImport   1 RDVAQMVVSVINLTRTALINADFDRRMDLLIDLAALEGIRIYPAEATDELAPLADTR-PLRLLTADVRRQLGDHTRFASR 79 
3_pfamImport   2 AQLAQRIATTVSITRSALVYAPPPVRPSLLLDLATQESLRVQPRERSDVLEPLPHSD-YWTNVSGEIRNRLGSQTAIMWS 80 
Q2KUW0        68 NQMAQRVITAVNITRTALIYSQADERSKLLLDLATNEGIQVYPREITDFTQPLPDDD-YWQRVAQHIRSRFGAETQIAWS 146 Bordetella aviu...
CAL94325      52 RDLAQMVVSVVNLTRTALINAEPGRRTELLIELAALEGIRIYPAEPSDEVEPLPDTR-PMRLLTAEVRRQLGGDTRFAAR 130
Q5NYM7        75 RDLAQMATSVVNLTRTALINADVERRTELLIDLAALEGIRIYPAEPSDELLPLPDSR-AMRLLTEEIRRQLGAHTRFASR 153 Aromatoleum aro...
EEF24858      33 AG-ALQIVSTVKLTRLAVLAAQDDRRLDLLQELNQSEGIRIYSFDPLEEIDPLPSDP-LIQRIAKKVREQLGDKTIIAVN 110
Q1H3L4        29 MAAALQAITVVNYTRASLLAAHENRRLALLSELSGREGVRIYAADMLEEIEPLPNDH-LIRLIAEKIRERLGEDTLVVLN 107 Methylobacillus...
WP_015832801  41 QATALQAVTVVNYTRASLIASQENLRLALLSELTGKEGVRIYYADFMEEIAPLPDDP-FIHLVADKIRERLGEQTIITTK 119 Methylotenera m...
Q1LLZ9        49 QQIAMQVVSVVKLTRAALLYSDPARRRFLLLDLVQNEGIKVYPREKDDDFAAPTANPfLTQLVQQEIRGRLGEDTVIATT 128 Cupriavidus met...
WP_012346922 150 VNGSSGLWVGFLIE----TDQYWLQADPNRV 176 Leptothrix cholodnii
2_pfamImport  80 WKTLDGFWVSFRLDpddaNDEYWVMLPPERI 110
3_pfamImport  81 VNQVPGIWISFNIN----EDLYWLVFDRDQL 107
Q2KUW0       147 VNQVPGFWVSFRID----QDLYWLVFEREQI 173 Bordetella avium 197N
CAL94325     131 WKTLDGFWVSFQLDpe-dRDEYWVMLPPDRL 160
Q5NYM7       154 WKTLDGFWISFRLHpe-dKEDFWVMLPSERL 183 Aromatoleum aromaticum EbN1
EEF24858     111 HLDLPGLWVSFDIG----IDDYWLVIPSIKT 137
Q1H3L4       108 HFGIPGLWVSFSIG----QDDYWVVIPRIQV 134 Methylobacillus flagellatus KT
WP_015832801 120 HYGISGLWVSFGID----QDDFWVVIPNVHV 146 Methylotenera mobilis
Q1LLZ9       129 VNDIPGVWVSFEIE----GDDYWVAISPERF 155 Cupriavidus metallidurans CH34
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