Conserved Protein Domain Family
KORA

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pfam16509: KORA 
TrfB plasmid transcriptional repressor
KORA is a family of Gram-negative bacterial proteins that act as global repressors of genes involved in plasmid replication, conjugative transfer and stable inheritance in the IncP group of plasmids. KORA operates as a symmetric dimer, and contacts the DNA via the helix-turn-helix region at the N-terminus.
Statistics
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PSSM-Id: 495889
Aligned: 5 rows
Threshold Bit Score: 108.38
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014607067   7 LTAKEFETLRPYLsRLKERNVEAIRQIMVESRQQTDVADELGVTKKAVSQMVGKAWQAHIEhgeRPAGWTSISVTLPPDM 86  Xanthomonas alb...
CAZ15862       6 MTAAEFESIQPRLgRLTVDTVQIARRVLVEGKSQAQIAEETGLTRQRISKMVQRVMSAANE---FPPDWERVDEWMPPEL 82 
Q2SG87         1 MTEEQFRIAISGM-ELAESNRIIAHDLLVKHVRRKLIVRRTGLSNTRIGQIEKNVLANYAKr-lEALGLVRVEVLVSPEN 78  Hahella chejuen...
Q5NWB5        10 LTEAQFLEAIKGL-EIGKQTREIAWGVLVEGKKQAGYVTALGVTKGAVWQAVERVWGAHITk-aIPDGFERVTAVLPEHQ 87  Aromatoleum aro...
WP_008929989   5 LTESQFQAAIKGL-GVGQQTLEIAHGVLVEGKTQAEFVALLGVTKGAVNQAVKRVWDAHKAl--TPEGFERVTAILPEHQ 81  Gammaproteobact...
WP_014607067  87 AELVKD 92  Xanthomonas albilineans
CAZ15862      83 AMRVRA 88 
Q2SG87        79 VAQVRA 84  Hahella chejuensis KCTC 2396
Q5NWB5        88 AFIVKK 93  Aromatoleum aromaticum EbN1
WP_008929989  82 AFIVKK 87  Gammaproteobacteria
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