Conserved Protein Domain Family
SP24
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pfam16504: SP24 
Putative virion membrane protein of plant and insect virus
SP24, or structural protein of 24kD, is a family of putative virion membrane proteins of plant and insect viruses. These viruses are ssRNA positive-strand viruses, with no DNA stage. The family corresponds to the central region of the ORF3 of insect chroparaviruses and negeviruses and plant cileviruses, higreviruses and blunerviruses. It contains four transmembrane regions. Chronic bee paralysis virus (CBPV) is one of the more common member virions. SP24 is probably one of the major structural components of the virions.
Links
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Statistics
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PSSM-Id: 495885
Aligned: 41 rows
Threshold Bit Score: 59.5628
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
YP_009342334  52 LKDAIILCYYNLTTSPTLLSVYIFVWVISTAEILNIKKGPLEQWLDYLMTnka---twtLGVWINSLQLWIIRICIANKF 128
YP_009337660  20 FLDSLLVVLLRVVAHPVSLVLAVFLVLFVAAEVLE-TTGPLESLDKLIKQelgskdinsLEKFLLKGFDKCIVFVILYKT 98 
YP_009337717  27 IISDVLGAYKRLPMYPFPMFVLMLTLIVGLAEIYNGGEKPLEYLLNGIQAdlnneniptWEKTALKICKYVLEFIIAHKI 106
YP_009333289  17 FFQSCFDSYSVLVDSPFIFFLFIVAFFTLVAEINN-SYGPLELFSNALVEyck---edkSFKSIALLMLSIVTIVIKYKT 92 
YP_009388604  22 IFTGLFEGYYRIIRNPLALSFFIIGILGVFTLQNATD-GPLELIIKIIKEfdek-khseFLASIVKILIKLSDFLLKYKE 99 
YP_009337695  32 LIQSVQDAYTNVMQNAIATSMMALLVIITLAEHAQTK-GPLESMRDALAAlvdsgemsgAKNFIASAVHNILVYVVNHKD 110
YP_009345043  38 FFASAANSFYNIIYHAWALLFAILALLILLSEYGTSA-GPLEILFKALMKfkedpfapvILKSIASGILYILGYMITYKM 116
YP_009345040  38 FFSSVFNSFYNIIYHFWGLTFAVLGIFTLLSEYGTAS-GPLEVLLQAILKfisdpdvpiVLKSIASAFAWLLGYMVKYKY 116
YP_009333312  38 FFSSVFNSFYNIIYHFWGLLLAIFGVLTLLSEYGTTT-GPLEMLLKAIMKflsdpdvpvVFKSVASALAWLLGYLIKYKY 116
YP_009333210  46 FFASVLNSFYNLIYHFWGMVFAILGFSILLSEYGTTS-GPLEMILKALMNiindvhapvVLRSLATFLAWFFAILVRYKY 124

YP_009342334 129 AFLCLVNFSLPYLYKPSNKNLL-FTLGFSFLGTFMLAKTPLEIVVMGQMWFLYTQMRSPAQR-F-LITGVAAVTFilpst 205
YP_009337660  99 KVVATLAYSIFVALNPTKLRWS-VFGAAVLIVVAIPSLPVFYHIITAVALVFYLALQRIEHK------ALTVFIY----- 166
YP_009337717 107 KVFGFLMISIPVIIRPSKNNVY-IWVLLVAILIMMRNWGFFEYIVIGNLFYIYTQLLSLTNK-F-LIAMLIVVVV----- 178
YP_009333289  93 SVLLSLLFIIPALLDSSLSTW--LLSFFFVFVSFISSLDAYRLFLFSQFYYMYVFVDNHFYK-A-LLLFVSFIVF----- 163
YP_009388604 100 EFYLILLLLPIPIIY--TGNSVaFTTLFLIVFTFIYHKHVGTVALVIQSVFLYYSLDNLVNK---VITIFVFVYL----- 169
YP_009337695 111 VIIEVAWIWWPWVVKPSTKNM--WMSVVLSFFAVFAELTLFEIVALANAYFLWVSLRNPAHKtLaFIFGMVILVV----- 183
YP_009345043 117 AVGYALLLLVPVMVKPSARNF--VFAAVIILLAFMHYITIIQVLILAILFYLFVMLRTPAHK-F-FIVAMAVAVF----- 187
YP_009345040 117 VVAYSAILFVPAIVKPSTRNI--MFSFLLIFMAFLHYITILQVLLLSLLFYLFVMLRTPAHK-F-FVLFMALIVF----- 187
YP_009333312 117 MVAYSAILFVPAIVKPSTRNI--LFSGLLVFLAFLHYITILQVLLLALLFYLFVMLRTPAHK-F-FILFLVIMVF----- 187
YP_009333210 125 LMAYVMLLSVPVLVKPSGRNF--GFAVVIMALAILHYITFLQVMILALLFYLFVMLRTPAHK-F-FIVAAVVAVF----- 195

YP_009342334 206 gILEY 210
YP_009337660 167 -VAGM 170
YP_009337717 179 -LWNF 182
YP_009333289 164 -LLGY 167
YP_009388604 170 -VLGQ 173
YP_009337695 184 -SLEF 187
YP_009345043 188 -GVGI 191
YP_009345040 188 -SVGF 191
YP_009333312 188 -GAGF 191
YP_009333210 196 -AVGL 199
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