6YXP,7VDV


Conserved Protein Domain Family
SWIRM-assoc_2

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pfam16496: SWIRM-assoc_2 (This model is not part of the current CDD release)
SWIRM-associated domain at the N-terminal
Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Statistics
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PSSM-Id: 522359
Aligned: 23 rows
Threshold Bit Score: 238.428
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6YXP_A          7 RRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVH--ADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCF 84   human
EEC19174        6 RKRDGGPNLKFYESAETITQFDGVKQWLHKNCKKYTQ--AEPPTNKGLASLAIQLIQFQEDAFGKSVSKPPLTRLPMKCF 83  
XP_016772010    6 PKKDGGPNTKFFESQEILTQLDAVKQWLLKNCKKYVQ--TDPPTNKSLATLIVQLLQFQEDNLGKNVSKPPMTRLPMKCF 83  
EFN82761        6 PKKDGGPNAKFFESPDILAQLDSVKQWLLKNCKKYVQ--TDPPNNKSLATLLVQLLQFQEDNLGKNVSKPPMTRLPMKCF 83  
XP_002431232  519 siiDGGPNIKFFESPETLSLFDGIKSWLQKNCKKV----TDPPTAKSLSTLVIQLIQFQEDNFGKNVSKPPLTRLPMKCF 594 
XP_032522175    6 PKKDGGPNIEFFQSPESLAQFDQIRVWLQKNCKKHVQ--TDPPTKEGLAQLVIQLIQYQENKLGKNATDPPFMRLPMKVF 83  
EDO49454        4 RKKDGGPDWKYYETSEAAALFEPVKQYLLKNHKKYVQ--VEPPTNKGLATLVAQLLQFQEDNFGHTVAKPPLTKLPIKLF 81  
XP_046452863    5 PKKDGGPNLKFYESHETLLLFEGVKAWLSKNCKKYVQ--TDPPTAKSLSTSITQVIQFQEDTYGKNVAKPPLTRIPTKCF 82  
1_pfamImport    1 PKKDGSPNVKFFESPETLNMLEGVRTWLMKNHKKYLQ--ADPPTNKTLAALVLQLIQFQEDNLGKNVSKPPLTRLPMRCF 78  
EDX12745        6 PKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAhsSEPITKESLAQLLIHFLQYVEAKLGKNSADPPATRIPMRCF 85  
6YXP_A         85 MDFKAGGALCHILGAAYKYKNEQGWRRFDLQ---NPSRMDRNVEMFMNIEKTLVQNNCL 140  human
EEC19174       84 MDFKPGGALCHIFAAVYKFKSEQGWRRFDFQ---SPSRMDRNVEMFMTVEKTLVQNKCL 139 
XP_016772010   84 LDFKPGGGLCHILATAYRFKQEQGWRRFDFPvgkSGSRMDRTVEMLMAAERALVQNRCM 142 
EFN82761       84 LDFKPGGGLCHILATAYRFKHEQGWRRFDFPggkSGSRTDRTVDMLMAAERALIQNRCM 142 
XP_002431232  595 LDMKPGGALCHILATVFRFKSEQGWRRFDFQ---SPSRMDRNVEMFMQVEKALIQAKCL 650 
XP_032522175   84 MDMKAGGSLCTVLATMFRFKSEQRWRKFDFQvgkNPSRKDLNVQMMMEIESALLTAELL 142 
EDO49454       82 QDYSANGGLCTILACVYKTRTDQGWRRFDFQ---SPSRIDRNVEMFLNIERAVKEAKLL 137 
XP_046452863   83 LDFRPNGGICQILATVYKYRTDHGWRRMDFA---SPSRMERHIEMMVAIEKALIQAKCL 138 
1_pfamImport   79 LDFKPGGALCHLLATVYKFKVEQGWRRFDFQvskSPSRMDRSIEMFMNVEKALIHAKCL 137 
EDX12745       86 LDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSigkNPTRKDPNIQLLIEIEQALVEADLY 144 
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