Conserved Protein Domain Family
Meis_PKNOX_N

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pfam16493: Meis_PKNOX_N (This model is not part of the current CDD release)
TALE/MEIS homeobox family N-terminal domain
This entry represents an alpha-helical domain found at the N-terminus of members of the TALE/MEIS homeobox family. The TALE/MEIS homeobox family is involved in transcriptional regulation, often through the formation of complexes with HOX or PBX proteins. Members of the family play crucial roles in developmental processes, including patterning of the embryonic cuticle, eye field delimitation, and central nervous system formation. They are also implicated in cell fate determination, hematopoiesis, megakaryocyte lineage development, vascular patterning, and myeloid differentiation. Some family members are known to bind specific DNA motifs, thereby activating transcription of genes such as ELA1, EPHA8, and DRD1. The family's functions extend to the regulation of gene expression in response to signaling pathways, such as Wnt, FGF/MAPK, and retinoid signaling, and they are involved in lipid homeostasis and innate immunity.
Statistics
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PSSM-Id: 522356
Aligned: 5 rows
Threshold Bit Score: 150.361
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9N5D6  92 AMKRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSrdgSTSSDVCSSASFK-DDLNEFVRHTQenADKQYYVPNPQLDQ 170 Caenorhabditis elegans
Q5U4X3  62 GLKREKDEIYGHPLFPLLALVFEKCELATCSPRDNSg-sFPGGDVCSSDSFN-EDIAVFAKQVR--TEKPLFSSNPELDS 137 African clawed frog
O46339  89 VHKRDKDAIYEHPLFPLLALIFEKCELATCTPREPG---VQGGDVCSSESFN-EDIAMFSKQIR--SQKPYYTADPEVDS 162 fruit fly
P55347  50 PMDVDKQAIYRHPLFPLLALLFEKCEQST-----------QGSEGTTSASFD-VDIENFVRKQEk-EGKPFFCEDPETDN 116 human
Q0G825  53 KKSALFEKIASHPLMPIVELLLEKCETA--------------ATTFDRKAFEtDDIKRLFQSLEq-RGVQLSSNRDEVDE 117 Caenorhabditis elegans
Q9N5D6 171 IMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLD 211 Caenorhabditis elegans
Q5U4X3 138 LMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPID 178 African clawed frog
O46339 163 LMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPID 203 fruit fly
P55347 117 LMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSE 157 human
Q0G825 118 LMETAILALRTCMVELERVYSLMESFKAKYLATLRRTVCHE 158 Caenorhabditis elegans
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