3LYR


Conserved Protein Domain Family
COE1_DBD

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pfam16422: COE1_DBD (This model is not part of the current CDD release)
Transcription factor COE1 DNA-binding domain
Statistics
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PSSM-Id: 522326
Aligned: 6 rows
Threshold Bit Score: 450.446
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3LYR_A        14 GSGXN-AVRTWXQGAG--VLDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEK 90  human
EGV92440      22 PSSLG-SVRSWMQSAG--ILDSSTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDR 98 
XP_011441017  26 APVQNtSIRNWMQ-------PTSLDQGGTVGFGRAHFEKQPPSNLRKSNFFHFVLALYDRQGQPIEVERTAFIDFVEKEQ 98 
XP_029686041  21 GEEMD-PVRSWVRNVG--VVDANVAAQSGVALSRAHFEKQPPSNLRKSNFFHFVLALYDRHGQPVEVERTSFVDFVEH-- 95 
XP_001634762  10 ENSMK-NDRPVVGCLQhrVLEPQVTSTASGLLDRCHFEKQPPANLRKSNFFHFVLAFFDHNGQAVEIERASFIDFIEH-- 86 
XP_009018163  51 HPHSH-GVRNWMQAMDpvIISSSNTGTGCPGLGKAHFEKQPPNNLRKSNFFHFVLALYDRNGQPVEIERTAFIDFVEKEK 129
3LYR_A        91 EANSEKTNNGIHYRLQLLYSNGIRTEQDFYVRLIDSXTKQAIVYEGQDKNPEXCRVLLTHEIXCSRCCDKKSCGNRNETP 170 human
EGV92440      99 EPGTEKTNNGIHYRLRLVYNNGLRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETP 178
XP_011441017  99 ELEGQKTNNGIHYRLQLLYANGVRQEQDLFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETP 178
XP_029686041  96 DKSGEKTNNGTHYKLQLLYSNGVRTEQDLYARLIDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETP 175
XP_001634762  87 LPEDKNVRNGVLYRVLLLYSNGIRTEQDIFVRLIDAATKQIVPYEGQDKNPEMRRVLLTHEVMCSRCCEKKSCGNKNETP 166
XP_009018163 130 ERDDTKTNNGIHYRLQLLYCNGFRQEQDLYVRLIDSTSRQVIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETP 209
3LYR_A       171 SDPVIIDRFFLKFFLKCNQNCLKNAGNPRDXRRFQVVVSTTVNVDGH-VLAVSDNXFVHNNSKHGRRARRL 240 human
EGV92440     179 SDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGH-VLAVSDNMFVHNNSKHGRRARRL 248
XP_011441017 179 SDPVIIDRFFLKFFMKCNQNCLKNAGNPRDMRRFQVAICTTISVEGT-LLAVSDNMFVHNNSKHGRRARRL 248
XP_029686041 176 SDPVIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGH-VLAVSDNMFVHNNSKHGRRARRL 245
XP_001634762 167 SDPVVVDRYCLKFFMKCNQNCLKNAGNPKDMRRFQVHVSTSVDPMYG-MIACSDNMFVHNNSKHGRRTRSR 236
XP_009018163 210 SDPVIIDRYFLKFFMKCNQNCLKNAGNPRDMRRFQVAISSTPAVEGNaVLAISDNMFVHNNSKHGRKSRRV 280
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