4CT4,4B8C


Conserved Protein Domain Family
CNOT1_CAF1_bind

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pfam16415: CNOT1_CAF1_bind (This model is not part of the current CDD release)
CCR4-NOT transcription complex subunit 1 CAF1-binding domain
This is the CAF1-binding domain of CCR4-NOT transcription complex. It adopts a MIF4G (middle portion of eIF4G) fold.
Statistics
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PSSM-Id: 522319
Aligned: 73 rows
Threshold Bit Score: 224.301
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4CT4_A         32 IVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETV--KEEFM-PWVSQYLVMKRVSIEPNFHS-LYSNFLDTLKNPEFNK 107  human
Q7RN81        551 IIIPSSVIVGEIFSIFNTLCLLNIDEKIKILKDVM--QPEYY-SWLAFYIVKSRVSKEVNLHN-VFLEFIDKLSYPMLIE 626  Plasmodium yo...
XP_004361948 1062 LIEPEEVIRDKMFFIINNVSMYNLDAKVKEMKDIL--KPEFF-PFLAQYLVHKRVSIEPNFHN-VYMQFLDRLNILEFHA 1137
XP_020431534 1111 IVQPEEAIKDKMFFIINNVSMFNLDAKVKEMKDIL--KSEFY-DFLAQYLVVKRVSIEPNFHN-VYLHFLDRMNIPDLYQ 1186
Q4QCD3        842 VTAPPRVIQEQINFLIGNTDVRNLESNATELSQLL--RPEYY-EYFADYLVVKRAALEPNYHS-MYIELIAKLHSKDMER 917  Leishmania major
XP_002896389  986 IEQPDENVKDRIHFIVNNMSISNLEVKIPEVRKML--LPEYH-AWLANYLVVKRISTQPNYHT-VYLIFIEKLVRPELEH 1061
2_pfamImport    1 LVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKTHIqnHPEHH-GWLANYLVVKRICTQPNFHD-LYLDLVKELETPPLMD 78  
XP_003688217  759 QIKPELVSDSKIYVLLLNLTEKNFTTNLKHFKVLV--TPPYF-TYFCRTILSKFIS-QTNDNK-VFEKLIFGMNSKQLIE 833 
Q234Z9       1257 SLQIDESTKMRVNFALNNLSDGNIEKHQNDFRNYA--ENENFqKWFARHLVTQRATLKSEINVlLYTKLCERIDKPKLFS 1334 Tetrahymena t...
XP_004030745  652 qiPAEEQAKMKLTFIMNSMTEQTIEKYLQEIKQYL--ENENNmKWFANHLVLRRAPIEAENQS-NYINLIEKISKRTLMK 728 
4CT4_A        108 MVLNETYRNIKVLLTSDKA-AANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQqeLLYVVPFVAKV 186  human
Q7RN81        627 TIINMTYDYILILFKYINElKEVSAFRTVLKNLGSWLGFITLGRNKPLKSKILDLKLVLFEAYDKDC--LVCILPMVCKI 704  Plasmodium yo...
XP_004361948 1138 QILFFTQHYIHTLLSSEKI-KTDHSERTLLKNLGGWIGMLTLGKNKPLLQKFISPKDLLIYAADTGL--MIAVVPFVTKV 1214
XP_020431534 1187 QILYFTHQNIHTLLKSEKI-KADLTERTLLKNLGGWLGLLTLAKNKPLLQKFFSPKDLLVYSVDNGI--LNAVVPFVAKL 1263
Q4QCD3        918 ALRKATIGAVHRLLSSQKI-GTDSSERILLRNLGSWLGSITLEKNIPILQQDLHFKSLLCQGIREGK--LVPVVSFITRV 994  Leishmania major
XP_002896389 1062 EILKRTLQNARKLLTSGTI-TTNSQQRSLLKNLGSWLGVFTLARNKPLLQRDLDLKELLYVGYESGH--LIAVTPFVAKI 1138
2_pfamImport   79 AILKSVFHNVGKLLRSQKI-ITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGR--LIAVTPFVAKI 155 
XP_003688217  834 CMIHETVSALLVLLDTDSC------DISELHKLALWLGLITIAHDIEIANNILPLRQILIDSVENGY--IDKVISTVCGI 905 
Q234Z9       1335 FIIKDSLLLLHKLLLSEAA-IHASIRITTLKNLAHWIGMFTLNRNKPINSKYLNIKALIVNSYPNK---VDVIIPIVINI 1410 Tetrahymena t...
XP_004030745  729 LIIKDSLILLQKMLNTNVQ--ANQNERNIIKNLGSWIGQLTIKRNKPIFAKYLNLKAILSQSYPDK---IEIVLILIRKL 803 
4CT4_A        187 LESS--IRSVVFRPP-NPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINE-LKPGNLLK---DKDRLKNL 256  human
Q7RN81        705 LESI--KLSKNFKPP-NPWTTTMLCLLTEIHELPNAKTYIIFEVEVLFKNLSLDIQD-YQNKTVLL---SRRTPQYN 774  Plasmodium yoeli...
XP_004361948 1215 LDSC--QTSRVFKPP-NPWVMAIVRLLGEIYQLKESKNNIKFEIELLLANLKLDLAD-IKPSTLIK---DRREEMQR 1284
XP_020431534 1264 LESC--MQSRVFKPP-NPWVMAIVRLMVEIYNLKESKNNIKFEIELLFNNLKLEMSE-VKPSTLIK---DKREEALR 1333
Q4QCD3        995 LTSC--AKSRFFCPP-NPWTMAQLVLLMEMYTLPHLRVTLRFELELLLKSLDQSMQD-LAQYMRLH---ASHASTET 1064 Leishmania major
XP_002896389 1139 LEGC--KKSKIFKPP-NPWVMGLIHSMSEIYDVPDLKLNLKFEIEVLFKSFKLNVED-QRKAQLLH---TRRAPPRT 1208
2_pfamImport  156 LEGApsGNSRVFKPP-NPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIAD-VPMYGRLR---TRMTPAKE 227 
XP_003688217  906 LVHA--KESHTFRFP-NIWTSSILQELFQIYHLSVLSIPHLFEIEFLFNELFGNIKN-FKMPELVA---EYDRLSEn 975 
Q234Z9       1411 LLCC--KESKIFNPQtNRWVKRILSLLEEFKNVVQ-KETVKHQINQLFSNLQIDVNS-LEPCTYFRyylQESKKEAK 1483 Tetrahymena ther...
XP_004030745  804 LIYS--KESKIFQYQnNVWIRRIFSLLEEIKNLKKIKLQCKIELQTFFKDLQIESQQhLEPCTFMLynlESNNNRQi 878 
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