Conserved Protein Domain Family
Aquarius_N_1st

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pfam16399: Aquarius_N_1st 
Intron-binding protein aquarius N-terminal
This entry represents the ARM repeats domain found at the N-terminal of intron-binding protein aquarius, a splicing factor which links excision of introns from pre-mRNA with snoRP assembly.
Statistics
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PSSM-Id: 495803
Aligned: 59 rows
Threshold Bit Score: 427.361
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005851348     8 KLTLLAKENWSAgaAgDDGKRPAYKAELVAQIYREELggdSNKPPTNRRVQLLEISQYLENYLWPHFEagmaGSAAYQHL 87  
13_pfamImport    1 SIAHIAEKHFNS-----------WDPQVVENVFKNEL---EPSLFSPRKLLLLEYCQYLEKFLWPNYD----ENASLNHV 62  
XP_004994011    29 AIAKLASEHWPE-------IATGPKPEVVKQLY-TEL---RAKRFPQHKVSALEFSLLLENLLWPTFT----ADCGHEHL 93  
4_pfamImport     1 RITQIASKYWAP--NlDSNQYLPYDAKVVENIYNEEI---YKSNFSVRRIMILEFSQFLENYLWPNYIs---ANATFAHM 72  
XP_001989487    35 VIWQLASQYWSP--E-SKSEHLPYSADIIETIYADEI---TSGKNSARRINMLEFSQYLEQYLWPNYKr---ETATHAHL 105 
XP_002115896    13 VLTEYAIKYWAP--H--SSEKAPYDPEIIEKIYKEEM---LGSKFSIRRMVLLEFSQYLENYLWPHYDp---QKASISHI 82  
XP_009013179    20 VLTQLSKKYWAP--F-SDLPRLPYNAQVIDDIYAMEL---KKTHYSTRRIMLLEYNQFLENYLWPNYT----IKSTRAHV 89  
XP_042937538    16 PLMEIARQYWAP--Y--SLHSRPFDPNLVDAVYKNEL---LQNLFMQKKVVVLEFSQYLERYLWPNFIv---EEANNNYV 85  
3_pfamImport     1 TISTVAAKYWAP--F-TKGNHEKFDAKLVDVIYQNEM---TNTGFNPRKIMMLEFSQYLEGYLWPNYDp---EHASKAYH 71  
6_pfamImport     1 TISSIAAKYWAP--F-TKETHEKFDVKLIDTIYENEM---LKTQFNPKKIMMLEFSQYLEGYLWPNYKp---EDSSKAYN 71  
XP_005851348    88 MSMVVMVNQKFREQV-PGW-ACFQQQNKDFPTFFQHVLMVKT--EQEag--grMRMHEKVAYLVFAINAFQSLEDEAVRA 161 
13_pfamImport   63 LSICLMVNEKARQNI-SLW-DAFESDTSKFASFFQRVIQLMA--DNQ------LPLLLRRQVLVFLIQCFQSFENSTVRT 132 
XP_004994011    94 MCMVLMVNEKFLEGH-DPWvELCAADKEQLLTFFETAFTTCAn-PKD------LSYLERKHLNIFLIRCFQSLEHEVMRE 165 
4_pfamImport    73 MSIVIMLNEKFRERV-APW-QALKKQPDEFDGFIDQVLRASL--SDD------HSIKEQIALVVFLNHCFQCMETDLVRN 142 
XP_001989487   106 MSIVIMSNEKFRERV-EVW-NVFEQLPDQYPAFFRHVLNSCL--PDQatkksnSTLRERTALLMFLNHCFNSMEIELCRE 181 
XP_002115896    83 ISITVMINEKFRERV-QLW-EFLRNRPENFQALFRQIMNLTT--DDWe----kITIKEQTVLLLFLIHCFNSMESDIIRR 154 
XP_009013179    90 LCIVSMVNEKFRERV-PAW-NCFQSSGELFEDFFHRVVLISL--EKD------ISYAELCVVITFFIHAFNSLGSDLVRN 159 
XP_042937538    86 MSVIIMLNAKFRERI-PVW-RCISERSNQFPVFFRRILHLVLn-TEQ------VTLLERSEIITFLINCFNSVEVDLVRK 156 
3_pfamImport    72 LSIVVMVNEKFRERT-EAW-TTFSESPAHFPTFFHKVLELSLdtSKS------TTPAEQCALLTFLVNSFGSVETKIVHE 143 
6_pfamImport    72 LSIVVMVNEKFRERNlDSW-SSFTKQPEQFPAFFRKVLELSLd-ENS------LSPSEHCALLTFLVNSFGSVETPIVHN 143 
XP_005851348   162 QVLRLVSLPLWHAL-SRGRLQLELHDQPQLAKHWRHLAKKEAKAAQqegHVPVHQRPEATFLPgkpwpqagqsSLLTEYL 240 
13_pfamImport  133 ACLKLVTIGIWSHLaHQGKREKMFSEYPALEKLWNSSNKKMVAASE---ETRRQMESERDLLS----------TLMRNYV 199 
XP_004994011   166 FLQPYISLNTWHAL-LPEQRQEQFEQHPRLAKGWKKLLKRLKKMPD---DEQTVMLQKHLFVY----------DLIKGFF 231 
4_pfamImport   143 KMKKLVSISIWCSL-QERRRTLELRQVPKWQKLWNRLQKKDKELSP---ENKLKADLERTFLH----------KLCIKFI 208 
XP_001989487   182 QAKRLVSLSMWHCL-QPRRREQELRDVPEWRKYWKRLQKKEKD------NTKPDLMWERHFMQ----------NLIIDFL 244 
XP_002115896   155 EIQGLVSIAIWTCL-LPGRVEQEVQHNPKYKKRLKSIQKTYSKADE---E--TQLVYERQFLW----------KSMHKFL 218 
XP_009013179   160 QVMKLVTLLMWKNI-HQSLREWIFEENTTHKKVWKKLNKAFDSLEG---QKKVDAEVEVNFLA----------NHLDKFL 225 
XP_042937538   157 EVMKIVSLTMWSNL-LPIQREDLFQANPKLRKIWNKFETMAASKSD---DEKELLTFERTFMW----------NLLQIFK 222 
3_pfamImport   144 QTKKLTSIEIWEGL-LDSQRADLFKKQKKLRKVWENVQKKIKNEDE-------KMRFDRTFIW----------KLIENFK 205 
6_pfamImport   144 ETRKLVSIEIWQGL-LPSQREDLFKKQKKLRKIWDNVVKKMSPDTA----------FHREYLW----------KLIEKFK 202 
XP_005851348   241 EVLSAVv----PEEqameedgqeaavggsgklDRQaLLYCERFVEFLTDLLSQLPTRRFVHAVLEDRAVLVKCYMSRLYT 316 
13_pfamImport  200 DLLYKI-----PAEgq---------------vDQElIKISERYLEFFIDLEAQLPTRRFFNTLLDDHEIVVLSQMAPLMR 259 
XP_004994011   232 AALESI-----TADa----------------pDRHaIAFCERFLELLVDIEALLTTRRYLNTVVRACNVVSVCRLSALFS 290 
4_pfamImport   209 NVLENI-----PLEgd---------------lCVDhLNYCERFLEMLIDLETSLPTRRFFHVVLDDVHLINRCYLALLSK 268 
XP_001989487   245 NILERI-----PAEge---------------lNRNvVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALMSPLVQ 304 
XP_002115896   219 DILAKI-----PETgp---------------iSADlVQYCERYLEFIIDIETALPTRRFFNTLLDSCGFVVNCQLSTLIQ 278 
XP_009013179   226 TVVQSF-----QVTgp---------------iEPHkVDYCERFIEWMIDLLAQLPTRRLFNTLFHSKHFIVICRGSNLLK 285 
XP_042937538   223 QTLADVd----DESne---------------vGIDgIHFLERCLQLFIDLEALLTTRRFFNAILHASNILVNCTLSSLIT 283 
3_pfamImport   206 KTLTTIdsieeKEEgevg----------ensqIVDkIRYCERFIELMIDLESILQSRRFFNSVLHSTHLLTDCILSNLIS 275 
6_pfamImport   203 KTLQHFdgsegEEEge---------------dPVDyIKYCERFIELLIDLESILQTRRFFNSVLHSSHLLTNCLLSPLIS 267 
XP_005851348   317 HPEGR--LYVQLVDLLRFYLSFPIHDHTGDPLSEEDVTAAHYEHVQQLQRLFFKHV-PKLRELALANCGTVEKREVLRKE 393 
13_pfamImport  260 REDKDvdLIKKLLERLEFYSKFEINDQTGVALTDLEMTEAHCQQLIQLQHVAFRHFrEEIKELPLANLASIETRQDLLWH 339 
XP_004994011   291 LQDRGh-LFRQLTEMLEFYVGFEIDDFTGEPLTDDMMTARNYDEMHRLQRAAFQHFrERLQDFAFSHVSGINTRQALVQY 369 
4_pfamImport   269 RDEGH--LFKQLLDILKFYFHFEICQSTGDPLKENEVMQAHYDKIISLQATLFGKF-SKLQDFSLSNINAIDKYDSLIKH 345 
XP_001989487   305 REEGK--LFGQLLDMLKFYTRFEINDVTGNSLTDHDMTQLHYKKITSLQRAVFAKF-STLRVFALSNVATVDNRDSLEKH 381 
XP_002115896   279 REEGR--LFAQLLEILKFYAAFEINDHAGTALSYHDITDAHYDKITALQRMVFKHF-PELRDLALNNVASIDTRDSIMKY 355 
XP_009013179   286 REEGK--LFTELMDMLQFYAKFEINDKSGEALNEREVLIGCYDKMARLQKAIFKNF-PELKSVALQSASNVNCRKQLIKH 362 
XP_042937538   284 AEVGS--LFCQLVTMLKFYSRFEIDDVTGEPLTHNQMSEMHYNHVIKLQKAAFKYFrESMSDFYLLNVTAVDTRKALVKQ 361 
3_pfamImport   276 SEAGS--LFFQLVQLLKFYARFEIDDLSGRQLTHKEVSEQHYQNVTKLQKAAFQLFtETMKDFYLMNVSGVDTRRALQKQ 353 
6_pfamImport   268 TEAGS--LFFQLVQLLKFYARFEIDDLSGKQLTHKEVSEQHYKNVTRLQKAAFRFFkENMKEFYLLNVSGVDTRRALQKQ 345 
XP_005851348   394 LAALNPEELRFLvTRQLRcaavdgLVSDdDPWADD----------------AGFLAEVMI--------ATYEHRR 444 
13_pfamImport  340 LEPLSEDVLTRL-CNLLD------L--RsAPLDITigi-----------dtKEFLINVII--------SKYQKRA 386 
XP_004994011   370 LERLDDDRLREL-CAHMC------IGMPtSTTAEEeamggptvrtstahmsRELMTEVLC--------SRFTRRQ 429 
4_pfamImport   346 FKNLSNQELQNI-AMELN------L--IpDQEKRLkenw--------yrydSEFLLSLLV--------SRHEARE 395 
XP_001989487   382 FGALDAEGLKQI-ATFLN------L--VpNEAVEPfqwh---------rldEEFLRELLI--------TRHEKRC 430 
XP_002115896   356 LSELPRENIHQL-ASCLN------L--VpKPEKDDeq------------ysKKYLIELLI--------YKYERRL 401 
XP_009013179   363 FSTLPNKRLHEL-VAAML------L--VpSPNKQQq--------------qQQQLQQLLSpqqqllpqQQQQLRQ 414 
XP_042937538   362 FSSMSESELYKF-AEYLH------L--VpPQEFDLdvss---------syeKNYLIEMIT--------SRCERRI 410 
3_pfamImport   354 FRGMSHAEVYRF-AEYLH------L--VpTMVEDQqdlll-------gaysQEYLVETIT--------LCCERRP 404 
6_pfamImport   346 FGNMAHEEVYRF-AEYLH------L--VpEFGDDTieqakl-----lsrfsHEYLVETIT--------LHCERRP 398 
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