Conserved Protein Domain Family
DUF4998

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pfam16389: DUF4998 (This model is not part of the current CDD release)
Domain of unknown function
This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.
Statistics
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PSSM-Id: 522312
Aligned: 18 rows
Threshold Bit Score: 169.849
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_238326537    1 MDATYKDFLNGGEIVYNGKPELL--QVFSGNKRVKLKWYIVSDPKITSAKIYWNNPAHIEgepvipgqrpagrdsvVLAI 78  Pedobacter hep...
jgi:Phep_0504  42 CDKMDDIQRKYAEKEEQVYLGKV--DSIKYFSGFGRAKITWYIGSDPKVEKTIIYWNRRK----------------DSIV 103
Q8A2Z6         19 CNGMLDGIQPYLDEGEKIYVGKL--DSLKAFTGKNRIKIEGKMMYGVNQVKCVISYKDPItl------------eeKFKE 84  Bacteroides th...
Q8A3Q2         20 CSGQLDTIQEYLDAGETIYAAKM--DSVDIRPGYNRVEVTGLLKYGMDTERCVIHWTPDN----------------DSLV 81  Bacteroides th...
Q8A089         20 CGDMYDVHEKYLKMGEETYLGIA--SDLEANSGFNRIELKWKLNADPRINASIISWEGCE----------------TPIE 81  Bacteroides th...
WP_008586568   21 CTRSDEYYRDYLKNGEIYYPGRI--DSLSIIPGDRKAVLRFRMTTDPKIQTIKAFVRNSLsp------------nqTVLT 86  Niabella soli
WP_015809897   20 CKRMDSTYEKYVVPNGIIYPGKA--TSPSVKPGLNRIQISWARGTDPKVVKARIFWNNYR----------------DSVE 81  Pedobacter hep...
WP_015808373   21 CKKMDEVYKDFIVPGGLTYAGRV--TSPVIQSGRQRIKISWLRGADPNVNLARIFWNNYK----------------DSVN 82  Pedobacter hep...
Q8A3I9         20 CESMDATYKDFVKDGPIMYLTRLskDSITVRNGWERVLISFPIVKDGRSTKIALALNQS-----------------DTVR 82  Bacteroides th...
CDA76753       16 CENMEDVHKKYIADGEIIYRVKP--TTIKSYSGYNQAKLTWNLVCPKLVTQCRIEEN-------------------NSLL 74 
WP_238326537   79 QRGSGTD-SVQTFIDRLKEGIYTFSVFMYDDKGHSSVKSEVIGDVYGDNYQASITNR-PLDMPQLNILNgksDLYIPW-- 154 Pedobacter hep...
jgi:Phep_0504 104 KEFVRKGaGVQKDSVIVENLPEGSTLFEFRNVNNRGETSLYSSSTINVWGSEFADGL-RARNLTAFNFDy--AKSLFT-- 178
Q8A2Z6         85 FPIERTE-PRETFEFMLENLTEGQYDFSIVTYDPKNNTSIPTEVSAYAYGELYQQAL-TNRILHSISPE----QKEIVne 158 Bacteroides th...
Q8A3Q2         82 VPVKRID-PVDTFRVFIENLPEGTYQFEIVTYNKSGYRSISTSKGSKTYGDRYISSL-RVRSLLSTEVE----GENLL-- 153 Bacteroides th...
Q8A089         82 VPISADRdINDYISKIID-LPEGKYIFSIINKSETGKESLIQTISGEVYGSSYQAGL-SAQGINSMEAT---LSKGVT-- 154 Bacteroides th...
WP_008586568   87 FPVTQGD-YGKIKEYALDNLEEATYTIDIRTFASEKDSSRAVTASQFIYGQSYISTL-TNRSFLKFAGP----DATVN-- 158 Niabella soli
WP_015809897   82 VPVPADQ---DIISYTIPNLAENYYTFIIKTYDKDGRVSVPVEVSGDVWGERYRSTL-LNRLAVSSTIN---LANTLT-- 152 Pedobacter hep...
WP_015808373   83 VPIPATG---DTISVIIGNLEEKPYTFVARTYDNKGNKSVPVELLAESFGDKYQSFL-VTRPVVQSENS----GTVLT-- 152 Pedobacter hep...
Q8A3I9         83 YELAKNK----RTDILLENMREGSIIFSAWLEDDELNKSLATDFTGTIYGTQYQSYL-LNRSIVSKSMQ----SGNLV-- 151 Bacteroides th...
CDA76753       75 AELHVVYeDTVRMECILNNLEEKTHTFSIYTLDAEGNTSLKSEIIVDVYGAKYEANLrTNISLKSVWRKa-dNSNQVL-- 151
WP_238326537  155 -----------YGVAQQAVRI--DL---------IYTNTAGQVKTVQKKKIPNPadarrgmiwldrDTLFNFKDAPgaKV 212 Pedobacter hep...
jgi:Phep_0504 179 -----------LNLSPSTRGDsvIY---------SEIVYKDKAGAEKTVRIERA------------TVEVQLPNFP--DA 224
Q8A2Z6        159 sgqseriwaakLNWNISRGDGl-VG---------CNLEYERQDGTLGSKYISVD------------ETTTELDNFK--AN 214 Bacteroides th...
Q8A3Q2        154 -----------LNFSSEMAEA--LA---------TKVFYLNSAGEKQEQEVARG------------DNQIKITDWK--PR 197 Bacteroides th...
Q8A089        155 -----------IKWAPMEGCTk------------TMFTYTNNEGSEKTITLMEG------------ATTSIIPDAV--LD 197 Bacteroides th...
WP_008586568  159 -----------VPYAVFAREPnlPRlgnfypmqfTEVNYVTTIGDTVTVRITPY------------EEVAQMGGIK--NP 213 Niabella soli
WP_015809897  153 -----------IQFEPVLAGStiVK---------SEVEYTTTAGALKTVTVLPG------------TLSLQLTDYK--KE 198 Pedobacter hep...
WP_015808373  153 -----------INWSNANKSGgaYV---------TEVEYTNTANVTAVKRFSVD------------ELSSVISDYK--PG 198 Pedobacter hep...
Q8A3I9        152 -----------IKYSMLLDSTl-VA---------SRLTWNKGGEETTKISYYNK------------EGQDVLEDFT---G 195 Bacteroides th...
CDA76753      152 -----------IGLSEQSSSKv-VK---------TRVYYKNVDGKEAMQEVKTG------------EKEIVLEQVA--ED 196
WP_238326537  213 RYRTAYLPEETA 224 Pedobacter heparinus
jgi:Phep_0504 225 GEFKFRTVFFPP 236
Q8A2Z6        215 GILRYNSIYKPT 226 Bacteroides thetaiotaomicron
Q8A3Q2        198 GAYEVKTYYIPE 209 Bacteroides thetaiotaomicron
Q8A089        198 TEFKVTSYFKPS 209 Bacteroides thetaiotaomicron
WP_008586568  214 SIIKYRTVYKPT 225 Niabella soli
WP_015809897  199 TGYKLRTQHL-N 209 Pedobacter heparinus
WP_015808373  199 TTYRYRTEYRPG 210 Pedobacter heparinus
Q8A3I9        196 DSFIMETLYAPQ 207 Bacteroides thetaiotaomicron
CDA76753      197 SYFKLQDVYMPV 208
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