Conserved Protein Domain Family
CEBP1_N

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pfam16368: CEBP1_N (This model is not part of the current CDD release)
Cytoplasmic polyadenylation element-binding protein 1 N-terminus
This is the N-terminal domain of cytoplasmic polyadenylation element-binding protein 1.
Statistics
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PSSM-Id: 522307
Aligned: 8 rows
Threshold Bit Score: 409.663
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_011486063   1 MAFSLRND-ARRPENPDT--ESPALSTCSNADIFRRMNSILGNALDFTGVCSTPnsSSKQKPD-------LLCE--SELa 68 
NP_001017330   1 MAFPLKDDlGRAKDCWGCpsETPALSTCSNADIFRRINAMLDNSLDFTGVCTTP--NTKGKCE-------HLQDypDSE- 70 
XP_006628999   1 MAFSLKEDlTRAHDHWDS--EAPALSTCSNADIFRKMNTMLGNSLDFTGVCTTP--ITKTKRD-------NLSDlqDSDv 69 
2_pfamImport   1 MAFSLKNE-ARRPDSPDP--ETPALSTCSNADIFRRMNTMLGNALDFSGVC-------KNKTN-------KLFK------ 57 
KAG9260838     1 MAFSLRDN-PRSLNRWDS--DTPALSTCSNADIFRRMNTMLGNSLDLTGVCTTP--SAKTKRDslignfpQLFDrpDSDl 75 
Q9YGX5         1 MAFSLREN-PRLLNCLDS--DIPALSTCSNADAFCRMNTMLGNSLDLSGVCTTP--TAKCKRD-------PFNDrpDSDl 68  zebrafish
NP_085097      1 MAFPLEEEaGRIKDCWDNq-EAPALSTCSNANIFRRINAILDNSLDFSRVCTTP--INRGIHD-------HLPDfqDSE- 69  human
XP_025009585   4 lsfqKEDRgRSIKDCWDSp-DAPALSTCSNADIFRRINAMLDNSLDFSGVCTTP--ITKSKRD-------VLPDfqDSD- 72  chicken
XP_011486063  69 AVGSRRMLF-----PncggipgSQDMPPSRGQSTV-------TDLGLGLQSLRLSGWDRPWSSQETDthappSQHQAGSP 136
NP_001017330  71 GAAASRMLF-----S-------TSHEPLPRGLPDT-------NDLCLGLQSLSLTGWDRPWSTQDSE-----AAGQTSTP 126
XP_006628999  70 SAVGSRMLF-----P-------STTQESSRVLPDV-------NDLGLGLQSLSLSGWDRPWSNPDAE-----SSAQTSSP 125
2_pfamImport  58 TLFSTKVVFgvfyvP--------AEVVTPSGAPDSfrcclhhSDLGLGLQSLRLSGWDRPWSSQDTEalhspSQVHSSSP 129
KAG9260838    76 SAVRSRMLF-----P-------STSQDSSRGLPDV-------NELGLGLQSLNLSGWERPWSSQDSE-----QSAQNSNA 131
Q9YGX5        69 SAVRSRMLF-----P-------SGGQDSSRGLPDV-------NNWGLGLQSLSLSDWERPWSSHDTD-----PSVKTNTA 124 zebrafish
NP_085097     70 ETVTSRMLF-----P-------TSAQESSRGLPDA-------NDLCLGLQSLSLTGWDRPWSTQDSD-----SSAQSSTH 125 human
XP_025009585  73 EAVASRMLF-----P-------TSTQESSRGLPDT-------NDLCLGLQSLNLTGWDRPWSTQDTD-----AAAQTSPQ 128 chicken
XP_011486063 137 SMLGILNSPFSSILEK--PSGYLSHDsMSMtADFLEKFPGIARMA----NRPDCSSLLDSRSSSPEDSETSGFSSGSDHL 210
NP_001017330 127 TAAQSVFSMLNSPMGKpsPLGFLPLD-PIG-SDLVEKYPTPLLRG----SRLDSRSILDSRSSSPSDSDTSGFSSGSDHL 200
XP_006628999 126 SMLGMLNSPLGNILGK--PLGLPPLD-PIG-TDFLDRFPGMAPRN----SRLESRSLLDSRSSSPADSELSGFSSGSDHL 197
2_pfamImport 130 SMLGILNSPFSSILGK--PHGYLPPEsMSMtADFLEKFPSMARMA----SRLDSSSLLDSRSSSPEDSETSGFSSGSDHL 203
KAG9260838   132 SMLGMLGSPLGQLLNK--PQGFSSHEsSTGpSDFLEKFPALA--------RLNSRSLLGSHSSSPVDSETSVFSSGSDHL 201
Q9YGX5       125 SLQGILGTP-SQLTNK--LSNYS--DsSIGaTDFLEKFPGMA--------RLNSQSFLDSHSISPVDSETSGFSSGSDHL 191 zebrafish
NP_085097    126 SVLSMLHNPLGNVLGKp-PLSFLPLD-PLG-SDLVDKFPAPSVRG----SRLDTRPILDSRSSSPSDSDTSGFSSGSDHL 198 human
XP_025009585 129 SVLSMLSSPLGNVLGKp-PLGFLPLD-PIG-SDISEKFSAPALRNsrldSR----SLLDSRSSSPSDSDTSGFSSGSDHL 201 chicken
XP_011486063 211 CDMLSTLRISPPLPY--L-ASNVQKDLLRL--GSRLDpqETSTPLTppSSYA-SSTLSRRWRAGSPWPGSDMLDHSDEAF 284
NP_001017330 201 SDLISSLRISPPLPFlpL-GGGVSRDPLKLgvGSRLD--QDHAALA--AATAsPLGISKRWPGTSVWPSWDLLDSAEDPF 275
XP_006628999 198 CDLLSSLRISPPLPF--L-MGNMQKDPLKLdgGSRLD--QDQLSLAsaANVTtPTSLAKRWPGASVWPSWDLLDSPDGPF 272
2_pfamImport 204 CDMLSTLRISPPLPY--L-ASSMQKDLLRL--SSRLDpqDSSSPMTppPSASpTSAISRRWRSASPWPGAELLDQSDDTF 278
KAG9260838   202 SDLLSSLRISSSVPF--L-MSNVPKDPLKLslSSRME--LDSSSMTppPSATpGSSLSRRWPGASVWPNWDLLETPEGPF 276
Q9YGX5       192 SDLLSSLRISPSVPF--L-MSSMQRDPLKLalDSRMD--HSSSPLTppPSASpSGSLSHRWPGASIWPSWDLMKTPESPF 266 zebrafish
NP_085097    199 SDLISSLRISPPLPFlsL-SGGGPRDPLKMgvGSRMD--QEQAALA--AVTPsPTSASKRWPGASVWPSWDLLEAPKDPF 273 human
XP_025009585 202 SDLISSLRISPPLPF--LpLSGVSRDPLKMgvGSRMD--QDQAALA--AVTSpPASASKRWPGASAWPSWDLLDSPEDPF 275 chicken
XP_011486063 285 SIEREARLHRQAAAVNEATFTWSGQLPPRNNKDP 318
NP_001017330 276 SIEREARLHRQAAAVNEATCTWSGQLPPRNYKNP 309
XP_006628999 273 SIEREARLHRQAAAVNEATFTWSGQLPPRNYKNP 306
2_pfamImport 279 SIEREARLHRQAAAVNEATFTWSGQLPPRNNKDP 312
KAG9260838   277 SIEREARLHRQAASINEATFTWSGQLPSRNYKNP 310
Q9YGX5       267 SIEREAWLHRQAASINEATFTWSGQLPPRHYQNP 300 zebrafish
NP_085097    274 SIEREARLHRQAAAVNEATCTWSGQLPPRNYKNP 307 human
XP_025009585 276 SIEREARLHRQAAAVNEATCTWSGQLPPRNYKNP 309 chicken
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