5UZH,1N7G,1RPN,6BI4,1UDC


Conserved Protein Domain Family
GDP_Man_Dehyd

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pfam16363: GDP_Man_Dehyd (This model is not part of the current CDD release)
GDP-mannose 4,6 dehydratase
Statistics
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PSSM-Id: 522304
Aligned: 201 rows
Threshold Bit Score: 225.124
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5UZH_A          5 LITGITGQDGSYLAEFLLEK--GYMVYGIIR--RS-SSF-NTGRVEHLYKD--IHItKA---KFKLLYGDLTD-TGNLIS 72  Naegleria fowleri
WP_013451300    8 LITGGAGFIGSNMIRYLLSE--ESGFKGVVI--NV-DLLtYAGNLESLIDVekSFG-GGsnpRYKFVKADIRD-RSAIEN 80  Calditerrivibr...
WP_014164851    6 LITGGAGFIGSHVVRQFVTK---YAEYSIFN--LD-ALT-YAGNLENI-KDieNY---P---NYTFLKGDIVD-ENYINE 70  Flavobacterium...
WP_014202011    7 LITGGAGFIGSHVVRLFVNK---YPEYKIYN--LD-ALT-YAGNLENLKD---IED-KE---NYEFIKADIVD-GDAMDK 71  Owenweeksia ho...
WP_014022880    6 LITGGAGFIGSHVVRLFV-K--KYPNYRIVN--LD-CLT-YAGNLENLK-D--IEG-EK---NYVFAKADINN-EELLKE 70  Cyclobacterium...
13_pfamImport   1 LITGGAGFIGSHVVRLFVN---QYPDYRIIN--LD-LLT-YAGNLENLKDIe---K-SP---NYEFVKADICD-FQAMKQ 65 
WP_012796980    6 LITGGAGFIGSHVVRLFVNK--YPDYH-IFN--LD-KLT-YAGNLENVADVa---N-AP---NYTFIQADICD-YERMKA 70  Capnocytophaga...
Q4CYB9         25 LVTGGLGFIGSNFINHLLRThsGVHVYNLDKvdYC-SSF-R--SIEN-PSDpyYH----------FVRGNITN-ADLVMY 88  Trypanosoma cruzi
XP_001482102   20 LVTGGAGFIGSHTLDYLVQK--YPDCKFTCV--DK-LSY-ATNYLENNLRKvsGC---D---NFTFIKLDLAEeHQRLDE 87 
WP_012683458   13 LVTGASGFVGSWLLPALSAE--GADVFGLTM--TPdADV-PAGRGVPV-------M-PT---SIQWRSGDLRD-DRFVQR 75  Gemmatimonas a...
5UZH_A         73 IIAKI--KPDEIYNLAAQSHVKVSFEMPEYTANVDGIGTLRL---LEAIR-----AC-----GLE-K--K--TKFYQAST 132 Naegleria fowleri
WP_013451300   81 IFKNY--NVDCVIHFAAESHVDRSILGPEAFITTNVLGTYTL---LDVARkywqeIY-----GTL-S--DapVLFHHIST 147 Calditerrivibr...
WP_014164851   71 IFAKY--QFDGVLHLAAESHVDRSITDPLAFVKTNVIGTMNL---LNAAK-----NL-----WKD-NfeG--KRFYHIST 132 Flavobacterium...
WP_014202011   72 LFADY--KFDSVIHLAAESHVDRSITDPLSFVKTNIIGTVNL---LNSFR-----DTw---kGNF-E--G--KLFYHIST 133 Owenweeksia ho...
WP_014022880   71 VFNDY--QITDVIHLAAESHVDRSITDPLAFVKTNVMGTVNL---LNTAK-----NF-----WQDkE--N--HLFYHVST 131 Cyclobacterium...
13_pfamImport  66 LIESK--NISGIIHLAAESHVDRSIKDPFTFAKTNVMGTLSL---LQAAR-----EVw---nGNW-D--G--KLFYHVST 127
WP_012796980   71 LFAEN--HIDGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSL---LQAAR-----EA-----WKD-NmqG--KRFYHVST 132 Capnocytophaga...
Q4CYB9         89 VLRHH--DIDTIINFAAQSHVDNSFGNSLSFTYNNVLGTHVL---LECAR-----TY-----GRI-E------KFIHVST 146 Trypanosoma cruzi
XP_001482102   88 LINHSanNFTTIINFAAESCVDKSFNDPLYFTKNNVLATQNL---LECCR-----TLlnskpNLR-R--N--FKFIHIST 154
WP_012683458   76 VVDEA--APDVVIHLAAISHLPTAAADPAAAWDINVTATARLlhhLDRIR-----QE-----GRA-D--P--VIL-LAGS 137 Gemmatimonas a...
5UZH_A        133 SELYGLVQ--E--VP-Q-KETTPFYPRSPYACAKLYSYWIVVNYREAYNM----FALNGILFNHESIRRG-PTFVTR-KI 200 Naegleria fowleri
WP_013451300  148 DEVYGSLG--D--TG-YfTENTPYDPRSPYSASKAGSDHLVMAYHHTYGL----PVTLTNCSNNYGPYQFpEKFIPL-MI 217 Calditerrivibr...
WP_014164851  133 DEVYGSLG--D--TGlF-TETTSYDPNSPYSASKASSDHFVRAYGETYGL----PYVLTNCSNNYGPY----HFPEK-LI 198 Flavobacterium...
WP_014202011  134 DEVYGTLG--E--TG-LfEETTSYDPNSPYSASKASSDHFVRAYGETYGL----PHVITNCSNNYGPNQ----FPEK-LI 199 Owenweeksia ho...
WP_014022880  132 DEVYGSLD--E--GG-YfLETTPYDPQSPYSSSKAASDHFVRAYANTYGL----KTVISNCSNNYGPNQ----FPEK-LI 197 Cyclobacterium...
13_pfamImport 128 DEVYGALQ--MdnTL-F-TENTKYDPHSPYSASKASSDHFVRTYQDTYGL----PTL---ISNCSNNYGS-YQFPEK-LI 194
WP_012796980  133 DEVYGALEigE--AL-F-TEQTPYDPQSPYSASKASSDHFVRAYHNTYKL----PVVISNCSNNYGSHQ----YPEK-LI 199 Capnocytophaga...
Q4CYB9        147 DEVYGQVT--D--SK-K-EE-GTLNPTNPYAATKAAVEYIVKSYHISFGL----PCIIT---RGNNVYGP-YQYPEK-LI 210 Trypanosoma cruzi
XP_001482102  155 DEVYGEQK--E--GEiI-DEDGPLHPTNPYAASKAACDLIIEAYKHSYKIpitlIRSNNVYGPRQFPEKI-IP-VCL-KA 226
WP_012683458  138 AEQYGRDA--ShgAL-L-SEDARQAPRTVYAATKAAQEVLAFQCWRATGL----RTMVARSFNHSGPGQP-PRFLLPaLV 208 Gemmatimonas a...
5UZH_A        201 TMAVARI-KLG-L-QDCLYL-GNLDAERDWGHAKDYVEA---MWLML-QQ--EQPRDFCVATGEKHSVREFVEKAFACIG 270 Naegleria fowleri
WP_013451300  218 LNMIE----DK-P-LPVY---GDGKNIRDWLYVEDHNVA---VWQVI-RY--GKVGEKYNIGGE----NEWENIRLLEYL 278 Calditerrivibr...
WP_014164851  199 PLFINNIiHKK-P-LPVYGD-GNY--TRDWLFVKDHAVA---IDLVF-HE--GKN-------HETYNIGGFNEWKNIDLV 260 Flavobacterium...
WP_014202011  200 PLFIHNI-KHNkS-LPVY---GDGKYTRDWLYVIDHARA---IDQVF-H---DGK------EGETYNIGGFNEWQNIDLI 261 Owenweeksia ho...
WP_014022880  198 PLCIHNI-KQN-KpLPVY---GKGENIRDWLFVVDHARA---IDLVF-HE--G-------KTNETYNIGGFNEWKNIDIV 259 Cyclobacterium...
13_pfamImport 195 PLFINNI-RNN-KpLPVY---GRGENVRDWLYVEDHARA---IDVIF-HK--GK-------IGDTYNIGGFNEWKNIDLI 256
WP_012796980  200 PVCIYNI-VDN-K--PLPIY-GKGENIRDWLFVEDHARA---IDTIF-HQ--GK-------DGDTYNIGGFNEWRNIDLV 261 Capnocytophaga...
Q4CYB9        211 PRFIMLM-NAG-K-K-LTIQ-GNGSNKRTFIHASDVARA---FVAII-NH------GFI---GDVYNIGSCDEKSVLDIA 272 Trypanosoma cruzi
XP_001482102  227 LQKASPT-GIA-E-KERIPIhGNGRHTRRYLHVLDFAKAvdhIWNWL-KNtsESSSDFLGETFNVGTDDEVDNLSMVKLI 302
WP_012683458  209 ARARGLT-DAA-P-GTPMPV-GNLSPIRDFLHVCDVVAA---YISLCrQG--TPGEAYNVASGTGWSVREVLDRVVARAG 279 Gemmatimonas a...
5UZH_A        271 QTVEWKGE--RGTVEEHGVVDGVVRVRVDPRYFRP-TEVDQL-LGDPTLAE-TVLGWKRKVSFEELVRGM 335 Naegleria fowleri
WP_013451300  279 IQIV-------SEETGKPQEKLKELITF--VKDRP-GHDRRY-AIDCTKIK-HELGWKQSVSFEEGLRKT 336 Calditerrivibrio nitrore...
WP_014164851  261 KLLCV--R--MDEKLGRNEGESSQ--LITYVKDRP-GHDLRY-AIDATKIN-KELGWKPSVTFEEGLEQT 321 Flavobacterium columnare
WP_014202011  262 KILIKQ----MDEKLGR--EVGESEKLITYVTDRP-GHDRRY-AIDANKIK-NELGWEPSVTFEEGLSET 322 Owenweeksia hongkongensis
WP_014022880  260 KLLC-EI---MDRKLGRDKGASAQLITF-VKD-RA-GHDQRY-AIDADKIN-KELGWKPSLTFEVGIEET 320 Cyclobacterium marinum
13_pfamImport 257 RVIIKEV----DKQLGRREGSSEKLITFV--TDRAgHDLRY--AIDATKIK-EELGWEPSLQFEEGIQRT 317
WP_012796980  262 KVIIKE----VDKQLGRPEGTSEKL--ITFVTDRA-GHDLRY-AIDATKLK-KELGWEPSLQFEEGIQKT 322 Capnocytophaga ochracea
Q4CYB9        273 RMTVKYVRahKCGEREPLADPSEEEVSRHLVFVKD-REFNDE-RYDISVEKlQELGWRQEVRFEEGYKET 340 Trypanosoma cruzi
XP_001482102  303 CTIFMRKK--F--GVESLDASSFIRHTKDRNYN------DFRySIDFTKIK--KVGWKQEISLEQGIEEL 360
WP_012683458  280 IR---------------------AVPTEDPSLVRP-VDVPAL-IGDPRKLQ-RATGWRATRSLDDIIDDL 325 Gemmatimonas aurantiaca
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