8UU7,8KAB,7OF2,3KXK


Conserved Protein Domain Family
GTP-bdg_M

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pfam16360: GTP-bdg_M (This model is not part of the current CDD release)
GTP-binding GTPase Middle Region
This family locates between the N-terminal domain and MMR_HSR1 50S ribosome-binding GTPase of GTP-binding HflX-like proteins. The full-length members bind and interact with the 50S ribosome and are GTPases, hydrolyzing GTP/GDP/ATP/ADP. This region is unknown for its function.
Statistics
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PSSM-Id: 522302
Aligned: 381 rows
Threshold Bit Score: 46.2892
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8UU7_v       109 AKTKEAQLQVQIAKLQYELPRIfgqgedmDQQs------gKGg--lS-----NRGSGEKKIETDRRTIKHQIRHLQKELD 175 Listeria monocy...
O84383       140 ALTAEAGLQVELAQARYLLPRLkrmwghlSRQ--------KSg---GsgggfVKGEGEKQIELDRRIVRERIHKLSRDLK 208 Chlamydia trach...
WP_013943053 128 AQTREAKLQVELAKSHYQLPRLkrlwthlSRQv-------------AsgkgfLKGAGERQIELDRRMVRDRISRLKNEIE 194 Simkania negeve...
WP_013182303 127 AHSKEAKLQVELARLKYLAPRLkrmwthlSRQ--------QAt---AgggayLKGKGEKQIEIDRRLLKTKIFHLQKEIN 195 Waddlia chondro...
WP_013924981 127 AKTKEARLQIEYARVKYQAPRLkrlwshlSRQ--------HGsg-gAgggayLKGEGEKQIEIDRRLIKKRLEQLQSEIQ 197 Parachlamydia a...
Q6MAA9       131 AHTKEARLQIELAKIKYEAPRLkrlwthlSRQ--------QGtsgsGgggayLKGEGEKQIEIDKRILKRKMDVLQKEID 202 Candidatus Prot...
WP_014243295 125 ARTKEAKIQIEISRLQYLLPRLsgfwthlSRQ--------KGg--iGv----RGGEGEQQIELDRRIVRERIEFFKKELD 190 Halobacteriovor...
B2UPE7       121 ARTREATLQVELARMQYSLPRMarmwnhlDRQgggsgggkGGg---Ga----ARGEGEKQIEVDRRLARARIEAIQRELV 193 Akkermansia muc...
XP_005845780  76 AATREGKLQVELAQSEYQLPRLtrmwshlERQ--------SGs---Gq----VKGMGEKQIEVDRRLLKGRMARLRRDIE 140
XP_015615566 246 AATHEAALQVTLAQMEYQLPRLtkmwshlERQ--------SGg--------qVKGMGEKQIEVDKRILRTQISALRKELE 309 Japanese rice
8UU7_v       176 MLVDDREV 183 Listeria monocytogenes EGD-e
O84383       209 NVERQREe 216 Chlamydia trachomatis
WP_013943053 195 EVRHQRDV 202 Simkania negevensis
WP_013182303 196 AVQAHRDT 203 Waddlia chondrophila
WP_013924981 198 EVKEHREI 205 Parachlamydia acanthamoebae
Q6MAA9       203 DVKAVRET 210 Candidatus Protochlamydia amoebophila UWE25
WP_014243295 191 EVRKSREQ 198 Halobacteriovorax marinus
B2UPE7       194 LVTRQRAT 201 Akkermansia muciniphila ATCC BAA-835
XP_005845780 141 EVRTHRRA 148
XP_015615566 310 SVRKHRKL 317 Japanese rice
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