Conserved Protein Domain Family
DUF4962

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pfam16332: DUF4962 (This model is not part of the current CDD release)
Domain of unknown function (DUF4962)
This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
Statistics
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PSSM-Id: 522293
Aligned: 10 rows
Threshold Bit Score: 687.215
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_276778144  31 QTLMHEMRATVYPQNGAQLADRYVSLQWPlhEDHNSVGAGLDGVEEEks-kKLDPLGRNYQVRLSQDIHF-NQNVISA-Y 107 Bacteroides cop...
WP_022163230  32 QSMMHESRVTPSPLNGAMVDDRFVSFQWPllAEAQSDGAPMDGFEHLv--kKIDKSKLAYKIRYAQDSTF-KKGCFQA-D 107 Bacteroides sp....
WP_022275068  33 VTLMHEMLSTPSPLDKATVNDRAVSFQWPlhADVDTSEEVLDGMKSTk--kKIDKSQLKYQLRYSQNAAM-KSNVVQV-E 108 Bacteroides fin...
WP_276776197  27 EAIHYRMRQHAYPAGGEVVKTNPVALLWP----------------------VVREGKVSYGVRLSQDPNFsEGKTIAVsR 84  Bacteroides cop...
WP_013632855  27 pmLHPRVREWAYPVNNVKVPSNSVCLLWP----------------------GITGKNAFYKIMMATDAQF-TKNVINGdE 83  Pseudopedobacte...
WP_008587036  30 EKLHARVREWPYPVNGITVPTDAPALTWP---ATNGAGGVLPMESGSavpaDPNIGKVRYQVLLATDKNF-SSGLIKSqE 105 Niabella soli
WP_015808643  31 EKLHARVREWPYPANGVTVPTNAPALQWP---ASNGTTMVLPMESDSavpeDPNIGNVRYQVVLASDKNF-LKDVIKSgI 106 Pedobacter hepa...
1_pfamImport   1 -TLMHEVRETPFPLNGATVTQNPPALMWP--DQFPHLGPVLDGVEET-----AHKPHVIYKIRLSQDPKF-KKEVIET-T 70 
CDA77266      34 ETLMHEVRATSVPFDGATVKINPPRFMWP--DKFPHLGPVLDGVPGT----VDEKRTALYRIRISQDKEF-KKDVITG-E 105
Q89YS9        31 QTLMHEVRETPSPLGGQHIAVNPPRFMWP--DKFPHLGPVLDGVEEE-----DHKPEVTYRIRIARDPEF-KSEVMTA-E 101 Bacteroides the...
WP_276778144 108 TSWPFYNPENNIRSGRWFWQYGY-VnSDGTTEWSETNSFDVVPNALKFA-PPTYRNFITNLPST-HPRILVFEKDWNQVI 184 Bacteroides cop...
WP_022163230 108 TRWPFYNPEKPLSPGTWYWQYAY-V-KDGQPQWSETLQVEVKDNGHRFC-PPSLKEVLACVPLS-HPRVWIIKDEWDKFR 183 Bacteroides sp....
WP_022275068 109 SRWPFFNPEKDLGTGVWYWQYGY-V-EDGNTLWSPILQFTVKANPDKFC-PPSFKTMQARLPKN-HPRILVQKDKWTDFM 184 Bacteroides fin...
WP_276776197  85 LPWAMYNTHRKLAKGTWYWQYQI-NkKGEYPQKSEVYQFEITDDVDVLE-TPTIHEFLDIVKGYeHPRIFLPPNQLNDFR 162 Bacteroides cop...
WP_013632855  84 QRWAVYPLHQNIKEGKWFWKYASkAtQNDKWQWSATNSFVVEKSKSNIS-SPSSKQVLVDLKNQkHPRLWSLNKNRESFF 162 Pseudopedobacte...
WP_008587036 106 QAWAVYPLHQALKPGHWYWKYGYaIkNSSKWTWSPVYDFVVAAKSAGIKpSPSVREVLQRNEGA-HPHLWNLHTGRETFY 184 Niabella soli
WP_015808643 107 QEWAVYPLHQALKPGKWYWKYAFaLkGNKQWKWSEVYDFSVDARYASAKvSPPVAEVLKRNGGP-HPRLWSMNRIEKEFY 185 Pedobacter hepa...
1_pfamImport  71 RHWAFFNPFRTLKSGKWYWQYAY-InGN-KETWSDILHFTISPQANTFN-PPSLEFLLQKLPKY-HPRVLLDKKDWEDFR 146
CDA77266     106 QPWSFFNPFKRLANGTWYWQHAY-VsPEGVEEWSPVRKFTVDDTALDFN-PPSFKDVLSRYSSQ-HPRVMMDAADWDDII 182
Q89YS9       102 RNWAFFNPFKLFEKGKWYWQHAY-LdKDGKEEWSPVYHFYVDEQTRTFN-PPSLQEVLAKFSQS-HPRILLDAKDWDQII 178 Bacteroides the...
WP_276778144 185 ESSKDKIEREWYLHESAKIMKTPI--VDFhNSINTDLLKGLDSEFKKNSMLTRESRRFVDKEEGNLEVLIRTYILTKDKK 262 Bacteroides cop...
WP_022163230 184 KESLGKVERAWYLERADKVLITPM--KDV-KDINTSQVKNLTNQMQINSYLTRESRRIIDAEEGNTEALIRAYLLTKDRK 260 Bacteroides sp....
WP_022275068 185 NNSKSKPEHQWYLERADKVLTIPM--QSV-NDIKADLAKGLKSEMQRSAMLTRESRRIIDKEEGNVELLIRAYLLTKDTR 261 Bacteroides fin...
WP_276776197 163 LRNADSKDAKKVIQEATKNLNQELipEAPtRPRDTTGVEGF----EKKVLMRFMYHRFGEVVRQPIENQALAYLLTQDDK 238 Bacteroides cop...
WP_013632855 163 TNNKSNPEALAFVASMRKLLGKPLpeEKPtRPRDTTGMNDL----QKKQMIEFMYHGFGNKVANPIKDLTVAYYLTKDRS 238 Pseudopedobacte...
WP_008587036 185 KNNRENPEAKKFIAVAEKLMKEPLpdESPvRRIDTVGKKGK----ELDGLMDRMYHDFGDRVGNPVRNLCIAYYLTKDKR 260 Niabella soli
WP_015808643 186 QKNLDNPEAKALVALARKLMKAPLpvEKPrRSLDTTGKTAV----QKKIMMTRMYHGFGDQEGTPVRNLCIAYQLTKDKQ 261 Pedobacter hepa...
1_pfamImport 147 IRNTKNKEAQWYIKRAQKAIQNPL--KHIqEEIDTTKLSSLDNSVQRKSYLIRESRKIVDREEANIEALVRSYLLTQDNI 224
CDA77266     183 KRNKTNPEALAFVKKATTCLSHPL--KHLqEEVDTTNVVKLTNIVQRESALIRESRKIVDREEANMNALVRAYLLTKDDK 260
Q89YS9       179 ERNKNNPEAQLYIQKARKCLNHPL--KHLeEEIDTTQVVKLTNIVQYRSALIRESRKIVDREEANIEAMVRAYLLTKDEV 256 Bacteroides the...
WP_276778144 263 YAEIAIDRLKSMIAWK--KSPYMKGDFNQATYLLLASTAYDSFYNILDEETKKLLLTEIKENGTKIFNHFVNHLANHIAD 340 Bacteroides cop...
WP_022163230 261 YADEAIRRVMIMSDWN--KNANVKGDFNDATLLSLCSMAYDSFYDLLTSAQKKELLDDIREKGNGMYNHFNNYMENHIAE 338 Bacteroides sp....
WP_022275068 262 YSKEAIKRIMEMLSWD--KNKNVMGDFNAATMLSLSSLAYDSFYDLLTGPQKQDLLKEIKRRGSEFYANFNNRLENHIAD 339 Bacteroides fin...
WP_276776197 239 YAKEALRQALHIAGMDp-KGPATQEDFNAASAMLAMATAYDVAYPYMSEAEKESLKKAIKVRGDHFFRSYANMFEAHGMD 317 Bacteroides cop...
WP_013632855 239 FLDEAIKQGIHVANMDp-KGYASRDDFNNGNIVEGLATLYDLGYDFLSEKDKQLLKSAIKTRGEMIYKNLPNRFELQMCD 317 Pseudopedobacte...
WP_008587036 261 FIEDAKRRALNLLAMDpdKNWATRSDFNNGAVLEALGWFYDLGYDFISPGEKELFKKVMVKRAKQIYSDLPNRFELHLCD 340 Niabella soli
WP_015808643 262 FIEDAKRRAMILARMDp-NGLATRDDFNGGAILEALAWFYDAGYDFLTEEERVLLRDVITVRAKRIYDHLPNRFEVHVSE 340 Pedobacter hepa...
1_pfamImport 225 YYKTAISRITEILSWK--HSRYFAGDFNSSVLLSICTLGYDSFYDLMTKNEKKILLEGIRENGNQFFEEFVNHLENRIAD 302
CDA77266     261 YYKEGIKRLTEILSWQ--KSKYFAGDFNLSTLLSMSTSAYDGYYNLLTPQEKQFLLDNIQHLGDKFYHEYVNHLENRIAD 338
Q89YS9       257 YYKEGIKRLSEILSWK--DSKYFAGDFNRSTILSMSTSAYDAWYNLLTPAEKQLLLETISENAHKFYHEYVNHLENRIAD 334 Bacteroides the...
WP_276778144 341 NHNWQMNLRIFTFAAFAVYGDLEEADKWTEYSYEIWRARFPGL-NEDGGWHNGDSYFQVNAKTLIEVPYFYSRVSGYDFF 419 Bacteroides cop...
WP_022163230 339 NHIWQMTLRILTMAAFATYGDLPEADTWTDYCYNVWLARFPGL-NKDGGWHNGDSYFTVNTRTLIEVPYYYTKLTGFDFF 417 Bacteroides sp....
WP_022275068 340 NHVWQMTLRIFTFAAFSVYGDLPEATVWADYCYNVWLARFPGL-NKDGAWHNGDSYFAVNFRTLIEVPYFYSTVTGFDFF 418 Bacteroides fin...
WP_276776197 318 NHVWQHTLRRFFMTAIAMVGEIDDADQWLSFCYEVWCSRFPVLgGRDGGWHDGSSYYQVNFETFILMPKILKNLTGVDFF 397 Bacteroides cop...
WP_013632855 318 NHVWQHILRNFSITALAVANDIPEANEWLTYVYEVWNARFPVLaSTDGGWHEGNGYFRVHYKTLIYLPLLFGEISGRDYF 397 Pseudopedobacte...
WP_008587036 341 NHVWQITLRNLAIGTVALLGEVPEAKEWFTYMYEVWSARFPVLgTTDGGWHESNGYFLVSFRSIIYLSQLFGDFSGVDYF 420 Niabella soli
WP_015808643 341 NHIWQITMRNLAIGTVAVMNEVPEAAKWLTYLYEVWSARFPVLgTTDGGWHEGTGYFKVNFRSIIYLSQLFGDFSGVDYF 420 Pedobacter hepa...
1_pfamImport 303 NHVWQMTLRILTMAAFTTYGDLPEANIWVDYCYNMWVARFPGL-NDDGAWHNGDSYFHVNIRTLIEVPAFYSRITGFDFF 381
CDA77266     339 NHVWQMTFRILTMAAFATVGEIPEATTWADYCYNEWVSRLPGL-TNDGAWHNGDSYFHVNIRTLIEVPAFFSRISGFNFF 417
Q89YS9       335 NHVWQMTFRILNMAAFATYGELPMASTWVDYCYNEWVSRLPGL-NTDGGWHNGDSYFHVNLRTLIEVPAFYSRISGFDFF 413 Bacteroides the...
WP_276778144 420 SDPWYAGNALYVMYQQPPFSKSGGNGSGHQKVYK-PNSIRVSYADALARLLNHPFLAQYSEMIIEKEPNILKKAFMAKPG 498 Bacteroides cop...
WP_022163230 418 SDPWYTNNVMYTIFQQPPFSKSGGNGSSHQNVAR-PNSIRIGYLDALARLTGNTYAADFVRRTLKVDPLYLKKALLAKPG 496 Bacteroides sp....
WP_022275068 419 SDPWYQGSVMYTMYQQPPFSKSGGNGSGHQGNLK-PNSIRVGYLDALARLTGNTYAADYVRRV-ATTPDYHKRLITVKSG 496 Bacteroides fin...
WP_276776197 398 DIPWFKNAGKFLAYSFPKNSYSTGFGDGFEAMLK-PNKKYIAYADALAREVGDPIARAYANNLVNGDLDKLGQD-----K 471 Bacteroides cop...
WP_013632855 398 EEEWMHNLAYYILYSYPPKSASVSQGDMHENLSD-MVRNQALFADALSTKIDNPYLVWYAKESRKLYPNFFRAN-----D 471 Pseudopedobacte...
WP_008587036 421 QMPWMQNLPYYLLYSFPPSGTSTAYGDQWEDLRKgITAGYGLFADALTYKLNNPYLNWYVQEIKRAHPEFFKKT-----D 495 Niabella soli
WP_015808643 421 KLPWMQNLPYYLLYTHPPASASISTGDSWENMPD-VTKSEAWFAEALALKVENPYLNWYVAQIKTRNPDFFKGT-----D 494 Pedobacter hepa...
1_pfamImport 382 SDPWYNGSALYTIYHQLPGSMSAGHGNSHENMKK-PNGSRVGYADALARECNNSYAADYVKKILEREPDILKKSFLGKSG 460
CDA77266     418 ADPWYNNNALYVIYQQPPFSMSGGHGNSHEKNLS-PNGGRVGYADALARECNNPWAAAYVYEILKEDPEAYYKSFEIKPA 496
Q89YS9       414 ADPWYNNNALYVIYHQPPFSKSAGHGNSHETKMK-PNGTRVGYADALARECNNPWAAAYARTILEKEPDIMKKSFLGKAG 492 Bacteroides the...
WP_276778144 499 DLAWFRIVCNK 509 Bacteroides coprosuis
WP_022163230 497 DLAWFRLQCDK 507 Bacteroides sp. CAG:633
WP_022275068 497 SLAWFRLQCDK 507 Bacteroides finegoldii
WP_276776197 472 DFRLYRLLTEK 482 Bacteroides coprosuis
WP_013632855 472 DFLLFRLLNYK 482 Pseudopedobacter saltans
WP_008587036 496 DYLFFRLLNYK 506 Niabella soli
WP_015808643 495 DYLFFRLLNYN 505 Pedobacter heparinus
1_pfamImport 461 DLTWYRLTTHK 471
CDA77266     497 DLSWYRCTTKK 507
Q89YS9       493 DLTWYRCITDK 503 Bacteroides thetaiotaomicron
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