Conserved Protein Domain Family
CcmF_C

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pfam16327: CcmF_C (This model is not part of the current CDD release)
Cytochrome c-type biogenesis protein CcmF C-terminal
This C-terminal region of CcmF, one of the cytochrome c-type biogenesis proteins, is associated at the C-terminal with Cytochrome_C_asm family pfam01578. It is possible that it is this domain which delivers reductant to haem on CcmE.
Statistics
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PSSM-Id: 522290
Aligned: 121 rows
Threshold Bit Score: 316.734
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013832697 315 LALLAINIGGALTLFALRAATVTEGERFAVVSREGALVFNNVMLSAILGIVLFGTLYPLVAEAM-GAKVSVGPPYFNPMS 393 Novosphingobium...
WP_013300096 315 LLIFVVLTGGALVLFAWRGGAMQAEGRFAAVSRESALILNNVVLAVVTFTVLIGTFWPLFREVTtGERITVGPPYYSAVT 394 Parvularcula be...
Q3J345       315 LMILAVFMGGALTLFAARASAMEAKGVFGIVSRESGLVLNNVLLTVACFVVFIGTIWPLLAELLwGRKLSVGAPFFNAAF 394 Rhodobacter sph...
Q00500       315 LFILAFFTGGALTLYAARASEMQAKGLFSMVSRESALVMNNVLLAVAALVVFTGTVWPLIAELFwDRKLSVGAPFFEKAF 394 Rhodobacter cap...
WP_011750211 315 LAILAFFVGGALLLYTFRAASMQARGAFTPVSREGALVLNNILLAVSTFVVFIGTVWPLVAEMLwDRRLSVGAPFFEQAF 394 Paracoccus deni...
Q163W8       315 LMIMGFFMGGALILFAFRAGAMEARGVFGVVSRESALVANNLLLAVSCFVVFVGTMWPLVAEMFfDRKLSVGPPFFNMAF 394 Roseobacter den...
Q5LS88       315 LIILGLFTGGALTLFAARAQAMEAKGVFSMVSRESALVLNNILLAVSAFVVFFGTLWPILAEMFfDRKLSVGAPFFNAAF 394 Ruegeria pomeroyi
Q1GHK6       315 LGILAFFTGGALLLFALRAQAMEAKGVFSMVSRESALVANNLLLAVSCFVVFVGTLWPVVAEMAfDRKLSVGAPFFDAAF 394 Ruegeria sp. TM...
WP_025312955 315 LLILGVFMGGSLLLFALRASAMEAKGVFGLVSRESGLVVNNLLLAVSTFVVFIGTIWPLLAEMFfDRTLSVGAPFFNAAV 394 Roseicyclus elo...
Q28QE3       315 LLILAIFMGGALVLFAFRAGAMEAKGVFSTVSRESGLVVNNLLLAVSCFVVFIGTIWPLIAELFfDRTLSVGPPFFDAAF 394 Jannaschia sp. ...
WP_013832697 394 ALFAVPMLMVLAVGPLLRWRRDAFSRVGKRLVIP-AMLVAAGviallVVgGVA-----FLPFIGLALAAGLAWASLMPLR 467 Novosphingobium...
WP_013300096 395 TPLVVVLALVMAAGVMLPWKRGYLRDLPRRLAAalGITGLSVli-----lAVTggrggVMAFAGLATGCFIILLTVSDLV 469 Parvularcula be...
Q3J345       395 TPFMVVIALVLPLGAVLPWKRAELGRGMRPLWGA-LALSAALga--lVFaLQTgr--sALGPVGLALGAWLVFGTLLDLW 469 Rhodobacter sph...
Q00500       395 TPFMVGLALLLPLGSMMPWKRASLGKLVRPLLPA-LVLTLAVla--lVWvMATgr--pMLALGAAGLGAWILFGALAEIW 469 Rhodobacter cap...
WP_011750211 395 TPFMVALAIILPVGAILPWKRGKLKRVLYPLRGA-LVFAGAVma--lVFaVSTgh--sALAVIGAGLGAWLVAGAVVDLW 469 Paracoccus deni...
Q163W8       395 SPFMLVLGILLPIGSAMPWKRAHIARALRPLRYV-FVLALAIgg--lAYaMQSgr--sLLGPIGLFLAAWIVMGTIIDFI 469 Roseobacter den...
Q5LS88       395 TPFMVALGVVLPLGAMLPWKRGKLGRVAHSLRYA-FVLALALai--lVWvMQTgr--sALGPVGLFLGAWITFGAIVDLW 469 Ruegeria pomeroyi
Q1GHK6       395 PPFMVALGLLLPIGSMLPWKRGKGAKTLWTLRYG-IVLALALag--lAWaIQTek--sLLGPVGVLLGAWVVSGAALDLL 469 Ruegeria sp. TM...
WP_025312955 395 TPFAFALAAVLPIGAMLPWKRARIGRALKALVPA-MILAISVgl--lAFtIFTgh--sVLAPIGVALSVWLVAGALVDLW 469 Roseicyclus elo...
Q28QE3       395 TPFVFALAVVLPVAAMMPWKRAKLDKPLKALMPA-AVLGLAVgl--lAWaMYTgr--tAIAPLGVGLAVWLVAGAATDLW 469 Jannaschia sp. ...
WP_013832697 468 ER-------------NLRRTPLPVWGMVIAHFGIAVALFGMSSESAFSVEKLVAVRPGETTQVGPWLVRLERV-EPVAGP 533 Novosphingobium...
WP_013300096 470 SRtklfsagpvaalrRAKGFPRAYWGGSLAHAGVGIAILGMVGTSLWVTERRVVLSPGEMTSLAGFEVRYEAI-RTIAEA 548 Parvularcula be...
Q3J345       470 GRtgrgal--ggrlaRLRRLPRADWGKATAHAGLGVTIFAVAAITAWQVESIRVMKPGETFALGRYDVLLEGV-REIEGP 546 Rhodobacter sph...
Q00500       470 QRagr-------tpgRILRLPRADWGKAFAHGGLGIVFAGVGLLMAGQVEDIRVAKAGDSFEVAGYTITLVSV-EDVPGP 541 Rhodobacter cap...
WP_011750211 470 LRtgns------glsRLRRLPRADWGKAVAHAGLGVTFIGISLLMAWQVEDIRVARIGETFTVAGYDITLESV-EERPGP 542 Paracoccus deni...
Q163W8       470 QRagrgp----drwaRILRLPRADWGKMVAHAGVGVTMMGVCGIMAWQYEDIRVAQFGEPYEVGRYTITLDKV-SNYEGP 544 Roseobacter den...
Q5LS88       470 SRtgrs-----gsvaRLFRLPRADWGKAVAHSGLGVTMFAIAGLMAWEVEDIRVARLGEPFEVGGFTLTLDGV-ERVQGP 543 Ruegeria pomeroyi
Q1GHK6       470 QRagrk-----drlsRLMRLPRADWGKAVAHAGLGVTIFAVAGLTAWQKEDIRVANLNEPFRVGPFELVLSAV-EEGRGP 543 Ruegeria sp. TM...
WP_025312955 470 SRtgrgsv--gnrmaRLTRLPRADWGKTLAHAGVGITLFGIATLTGYQREDIRVAQIGEPYIVGAYEIELQGVdENVRGP 547 Roseicyclus elo...
Q28QE3       470 SRtgrgpi--ggrlgRLTRLPRADWGKSIAHAGVGVTMFGVVTLTGYQIEDIRVAREGEAYQVGAYEVELLGVaENVRGP 547 Jannaschia sp. ...
WP_013832697 534 NWTALEAALKVrY--KDS-DPVIARPQSRSFWAPPQQTSESSLLTRWNGQLYSVLGGeae--dgRWQLRLWWKPFVTLIW 608 Novosphingobium...
WP_013300096 549 NYTTERSTFAL-E--RNGkVVARLMPERRWYPAAEQQTVEAAVLPRWANDIYIAVGEprgvedeARVVRLYHHPLALWLW 625 Parvularcula be...
Q3J345       547 NYRSTVADFRVt---RDGaEVATLHPEKRVYPVAAMPTTEAAIDYGFTRDLYLVIGDpqe--ggGYAVRSYIKPFANWIW 621 Rhodobacter sph...
Q00500       542 NFTAKTATMEVr---QGGkLVATLHPEKRIYPVQAMPTTEADIDNGFWRDVYLVIGDpqe--ggGWAVRTYVKPFANWIW 616 Rhodobacter cap...
WP_011750211 543 NYNSITAAMTVd---RNGqQVALLHPEKRVYPVQSMPTTEAAIQSGPFRDLYLVIGDeqq--ggGWAVRVYIKPFASWIW 617 Paracoccus deni...
Q163W8       545 NFLSTTGYITLa---QDGrEIAQLKPEKRIYPVAQMPTTEAAIDYDLFRDVYVVIGDeqa--ngGWAVRTYIKPLTNWIW 619 Roseobacter den...
Q5LS88       544 NYISTMGSVRLe---QAGrAIDTLHPEKRDYPVARMPTTEAAIDYRILRDVYVVIGDqqd--dgGWTIRTYIKPFANWIW 618 Ruegeria pomeroyi
Q1GHK6       544 NYFTTMGVVDVt---RNGkDVATLRPEKRVYPVAQMPTTEAAIDYRFTRDLYVVLGDaqe--ggGFTLRTYIKPFANWIW 618 Ruegeria sp. TM...
WP_025312955 548 NYLSTMASVAV-ReaESGrLISVLNPERRIYPVAGMPTTEAGINNGFTRDVYVTLGDpqd--ngGWALRTWIKPFANWIW 624 Roseicyclus elo...
Q28QE3       548 NYISTIASVAV-RdpETGaEIATLSPERRIYPVAGMPTTEAGINNGVTRDVYITLGDpqq--ggGWALRIWIKPFANWVW 624 Jannaschia sp. ...
WP_013832697 609 LGGLLIALGGVLALIGR 625 Novosphingobium sp. PP1Y
WP_013300096 626 GGGLLMAAGGALSLTDR 642 Parvularcula bermudensis
Q3J345       622 GGALLMALGGLLSLSDR 638 Rhodobacter sphaeroides 2.4.1
Q00500       617 AGCLLMAFGGGLSLTDR 633 Rhodobacter capsulatus SB 1003
WP_011750211 618 LGSALMALGGFISLSDR 634 Paracoccus denitrificans
Q163W8       620 IGSGLMSLGGLLSLSDR 636 Roseobacter denitrificans OCh 114
Q5LS88       619 GGCILMALGGALSLSDR 635 Ruegeria pomeroyi
Q1GHK6       619 GGSLLMALGGFLSLSDR 635 Ruegeria sp. TM1040
WP_025312955 625 GGTIIMAIGGLFSLSDR 641 Roseicyclus elongatus
Q28QE3       625 GGTIIMALGGFLSLSDR 641 Jannaschia sp. CCS1
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