5H0J


Conserved Protein Domain Family
DUF4918

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pfam16265: DUF4918 (this model, PSSM-Id:406630 is obsolete)
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Domain of unknown function (DUF4918)
This family consists of uncharacterized proteins around 230 residues in length and is mainly found in various Listeria species. The function of this family is unknown.
Statistics
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PSSM-Id: 406630
Aligned: 14 rows
Threshold Bit Score: 325.032
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5H0J_A           3 TFADKVIQFNKDLSYTGsTLPPGIRIMNPFKEh-EQTMHIVEAFYHKYYNDNQSRYLILGINPGRFGSGLTGIPFTDPKR 81  Pedobacter he...
WP_014217818     9 TQSYAILNFLKNLKPQL-KLGAGIEIMNPFSD--AVAVQLAETFYHKYYNDQHPRKYIFGINPGRFGAGVTGVPFTDPIR 85  Niastella kor...
WP_013767727     2 TVAQSISTHFLNLADHMpELPEGVEWLNPLGEi-QESRTIFQIFLEKFYADFQPRHLIMGINPGRFGGGITNVAFTDPLH 80  Haliscomenoba...
jgi:Ctha_1682    2 TFGEKALSFFKTISLDA-NLLGEVEVMNPYQD--LAVLACVQAFFEKYYDDFQKRIFVWGINPGRHGGGVTGIPFTDPFA 78 
WP_014558912     2 SFADKAIKYFSGLKTPE-LNFNQTELLNPYSS--SEVKKILKEFYLKYYNDDKERIFIIGINPGRFGGGLTGISFTDPVS 78  Ignavibacteri...
WP_044002281     2 SFASRLLPFLTEFPLPP-ALPDGVTAVSPYQE--PSPRALLTQFAHRYYTGVQPRVALLGINPGRLGNGRTGVAFTDPVA 78  Hymenobacter ...
jgi:Coch_1994    3 TFADRIINFNTHLEYNQ-SLPKGFDVLNPYMDn-PETMEVMRAFYHKFYNDNRQRKFIIGINPSRHGAGVTGVPFTDTKR 80 
WP_008583490     3 TFADKVIDFNRNLHYTG-KLPDGFRVLNPYLDn-PETMEVMGQFYHKYYNDNRQRKFIIGINPSRHGAGVTGVPFTDTKR 80  Niabella soli
jgi:Pedsa_1974   5 TFAQNVIDFNKNLKYSG-QLPNGFQVMNPYMDn-PETMQVMQAFYQKFYNDSDKRRFIVGINPSRHGAGVTGVPFTDTKR 82 
WP_014201898     2 TKAEQILDFYSNLNIDVsTLPLKVDVLNPYQNpsPEMEKVLHEFYHKYYGDHHKRGLILGINPGRFGAGITGIPFTDSYR 81  Owenweeksia h...
5H0J_A          82 LITECNIPYSGKLSHEPSSVFIYEMINAFGGAEAFYKQFYISSPCPLGFTSiaangKEKNYNYYDSKALEKAVYEFIIEN 161 Pedobacter he...
WP_014217818    86 LKDVCGIDSDLPKKAELSSLFVYAVIDAYGGPEAFYRDFYITALSPLGFTK-----NGVNLNYYDDKELLKDSEPFILQC 160 Niastella kor...
WP_013767727    81 LEKELGIPSSFPKKSELSAHFVYQVINAYGGPKLFYDQFFVTSVCPFGFVK-----NGKNYNYYDEKPLQKAATPFIEYH 155 Haliscomenoba...
jgi:Ctha_1682   79 LSEFLGISHSLAGQRELSSQFIYQFIAHFGGASAFYQKFYINSLSPLGFIQ-----NGKNYNFYDNATLQNKLTPFIEKS 153
WP_014558912    79 LREECRINNNLGNQKELSSKFIYSVAKEFGGVKKFFSRVFLTALYPFALLK-----NGKNYNYYDDKNLSEHLKPEIVKN 153 Ignavibacteri...
WP_044002281    79 LQECCGIPNELPRRREPSSQFVYEVVQALGGPTAFYQQFYLGSLYPLVLLK-----DNRNYNYYDSPALQKALLPAIRES 153 Hymenobacter ...
jgi:Coch_1994   81 LKSECGITMKSAHTHEVSSVFMYDMIKAYGGVTKFYNDFYINSPFPLAIVRkasdgKWLNANYYDEEALFKSLKDYMIET 160
WP_008583490    81 LEKVCGIKMESAYTHEVSSVFMYDMITAWGGARSFYKNFYINSPFPLAIIRranegKWLNANYYDDPKLFEMVKPFMIAS 160 Niabella soli
jgi:Pedsa_1974  83 LASVCGIEMKSAHTHEISSVFMYDMITACGGPQNFYKHFYINSPFPLAIIRnagedKWLNANYYDDLRLFEMVKDFMISS 162
WP_014201898    82 LKEFCDIDFPT-DTRETSSVFVYDVIQAFGGAKKFYSNWFIGATSPLGFIHqnskgNWVNYNYYDDPKLEKAVRPFIIDK 160 Owenweeksia h...
5H0J_A         162 IRKQL-TLGITTDTCFCLGTGKNEKFLMKVNAQYKFFKRIVALEHPRFIMQYKTASKQFYIDKYISA 227 Pedobacter heparinus DSM 2366
WP_014217818   161 IREQLaSIATTQDVCYCLGEGTNYRIFQKLNVKHQFFKEIVPLPHPRWVMQYRRKKMDEFVKVYVEK 227 Niastella koreensis
WP_013767727   156 LEALIeRCNMNRDQCFCLGEGQNYTFLQQLNAQKGYFQKVVPLSHPRFIMQYKRKSVDLYVEKYLEL 222 Haliscomenobacter hydrossis
jgi:Ctha_1682  154 ISSQM-AFGAERRVTILLGTGKLLKFFERLNAKHLFFERVLAVEHPRFVMQYKRKSLDQFLEKYAQT 219
WP_014558912   154 IKSQI-QFGAKRDFAILLGK-KNAAYFEILNYEHNFFRKIIVVEHPRYIMQYRLKQSDVYINKYLEV 218 Ignavibacterium album
WP_044002281   154 LHRQVtEVGLARRTAICLGR-RNALLLHRLNQELGLFRHIHVLDHPRYLMQYKRRDLLANVARYVEV 219 Hymenobacter swuensis
jgi:Coch_1994  161 LKKHI-ALGVDAQKVFVLGK-KNATFLQKLNKEATLFGEMVVLEHPRFIQQYKSKEKQLYIDKFLTs 225
WP_008583490   161 LEKHI-SLGLDTSEVFILGK-KNATFINQLNATAGLFSKATVLEHPRYIEQYKSKEKQLYIDKYILE 225 Niabella soli
jgi:Pedsa_1974 163 LKQHI-SLGLDTSEVFVLGK-KNADFISKLNKKEKLFEQLTILEHPRYIQQYKSKDKQLYIDKYIQT 227
WP_014201898   161 LQEQL-EICGNPRKCVVLGTGKNYKYLQKLNKKIQLFDEITPLEHPRYIMQYKLKSKENYVTKFLEA 226 Owenweeksia hongkongensis
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