Conserved Protein Domain Family
BDHCT_assoc

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pfam16204: BDHCT_assoc (This model is not part of the current CDD release)
BDHCT-box associated domain on Bloom syndrome protein
This family is found on Bloom syndrome-associated DEAD-box helicases in higher eukaryotes. It lies between the BDHCT, and DEAD-box families, pfam08072 and pfam00270.
Statistics
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PSSM-Id: 522246
Aligned: 14 rows
Threshold Bit Score: 152.277
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_020953540  432 ALLWRCRPASLGSPVasvss---psafpNGNSCPTGNSVKELAFPHCLSNSFSSGEHL---------------------- 486 
1_pfamImport    1 ASVWRCWPDSLGSPVddtvsasapdafpKGESCPAGSSVQELNFPHLPSHCGTTRECL---------------------- 58  
XP_003475802  421 DSVWKHNPDILGSPV-------------EDDCCPAESSIKGPHVPHLPSNSLFSRECL---------------------- 465 
EHB03240      423 GSVWRYRPGSLSSLV-------------ETDSYPTRSSVKDLSVLPLPSHSLSTRECL---------------------- 467 
XP_008273539  428 GSLWEVGPDSLGSPV-------------DGESCSVGDSVKAPTFPHLPSNSLSNGKCL---------------------- 472 
XP_003748936  423 GSLWRHRPDSLDNTV-------------QCDSCPVGHPGKELNSPYLPSHSLSTEECL---------------------- 467 
XP_005320222  427 GSVWRHRPVSLDNPV-------------ESDFCPGGNSVKELNFPHLPSNSLSTGKCL---------------------- 471 
XP_007479356  426 PLNWIYQANSHDLSVndmtafsslhsfqKGKSAFTGNLVREFKSLHLPSKPVSTTDCEgnfldkttrtfpnldistgmcs 505 
3_pfamImport    1 GSMWRCRPDALGNPM-------------EGDSCPTASS-DELHFPPIPSNSISSGGCL---------------------- 44  
ELK18290      422 GVVWRCRPDALGSPMgdvasvsspyafpKGDFCPRGNS-DEFNFPLVPSNSISTGECL---------------------- 478 
XP_020953540  487 -LTTTPGKTGFSATTKTVFERPPFNSHLQKSFVSSNWAETPRVEKRNESSYFPGNVLTSTAVKDQNKHTTSINDLEREIQ 565 
1_pfamImport   59 -LATTPGKTGFSATPQNPFERPLFSPHLQKSFVSSNWAETPRIEKRNESSYFPGNVLTSTAVKDQNKRAAPIDDLERETQ 137 
XP_003475802  466 -LNTTPGKTGFSATSSTPFERPLFSSHLQKSFVSSNWAETPRVEKRNESSYFPGNVLTSTAVKDQKKHAASVNNLERESQ 544 
EHB03240      468 -LTTTPGKTGFLATMSTLPERPLFSSHLQKSFVSNNWAETPRIEKRNESSYFPGNVLTSTAVKDQNKHAASVNDLERENQ 546 
XP_008273539  473 --TTPPGKTEFSAPTKHLSEGPSFSSHLHKSFVSGNWADTPRTGQRNGRCYFPENVLTSTAVRDQSKHRASASDTARDAR 550 
XP_003748936  468 -PTTASGKTGFSATPKSLSERPPLNSHLQKSFVSSNWAETPRTESRTESTYFPGSVLTSTTVKDESKHVASGRDIEREVQ 546 
XP_005320222  472 -LTTTPEKTESSDTLKNFFERPLFTSHLQKSFVSGNWAETPRIEKRNER-----NVLTSTAIKNQNKNIASKNYLEGEIQ 545 
XP_007479356  506 tQRTTPDKSESSSDKRNDSERISSSSQSPEPFISSNSVEISKTEEKYKRSHLLGNFLTSTAIKDQNKHINSVNDLRNGFS 585 
3_pfamImport   45 -L-TPPGKTGFSVTKKNLFERPLFNSHLQKSFVSSNWAETPRTEKRNESSHFPGSVLTSTAVKDQNKHTVSTDDLEREIQ 122 
ELK18290      479 -VTTTPGRAGFSATRKNLTEGPSFISHVQQCFVSSDQADTPRIEKRNESSHFPRNVLTSTAMTDQNEHIASV-DLEREIQ 556 
XP_020953540  566 ASCDIDNFDIDDFd-DD--DDDWENMMHNLAASKSSTAVYQPIKEGRPVKSVSERISSAKTDSLPVASTAQNKNFSESIH 642 
1_pfamImport  138 AACDIDNFDIDGFddDD--DDDWENIIHDLAASKSSTAASQPIKEGRPVKPVSERISSAKANCLPVASTAQDKN-SESVQ 214 
XP_003475802  545 ASPDVDNFNIDDF--DD--DDDWEKIMQDLTANKTSTAACQPIQKGGPLKSISEKIALAKMHSLPGAS---------VVP 611 
EHB03240      547 ASHDVDNFNIDDFd-DD--DDDWENIMHDLAASKPSTAAYQPIKKGGPLKSVSEKISAAKTHCLPGASVAQH-------- 615 
XP_008273539  551 AACDVDDFDIDDF--DD--DDDWEDIMHSLAANKSSTAAYRPIREGGPVRSASERISSAKTSCLPMVSTAHRRHISESVQ 626 
XP_003748936  547 ASYDIDNFNIDDFddDD--DDDWENIMHNFSVSKSSTAAYPPIKEGGPVKSLSERISSAKAKFLPVASTAQNKNLSESIQ 624 
XP_005320222  546 ASYDIDNFDIDDF--DD--DEDWENIMHNLTASKSSTAAYHPIKEGRPIKSVSEKISSAKTNCLSVSSTAQTKSFSESIQ 621 
XP_007479356  586 ETQDIDIFDV-----DDfdDSDWENPNYNSAEEKSSKNKYLPIREGQPIKSFSERTPMTKTNCLLMASANQNRSI--SIQ 658 
3_pfamImport  123 ASCEIDNFDIDDL--DD--DDEWENIMHGLATNKSSTAAYPPIKEGRPVKSVSERISPTKTNCLPVTPAAQNKNFSGSMQ 198 
ELK18290      557 ASYDTDNFDIDGF--DD--DDEWEDIMHNLAASKSSTAVYQPIKEGRPVKSVSERVSPSKTNCLPVASTPQNKNFSESIQ 632 
XP_020953540  643 NYTDKSEQNLTSRNLKHKHFQSL 665 
1_pfamImport  215 NYTDKSAQNLASRNLKHERFQSL 237 
XP_003475802  612 HHTDKLTQNLASRNTSQERFQSL 634 
EHB03240      616 -HTDKLTQNLASRNIKQECFQSL 637 
XP_008273539  627 NDADKPAQSLASGNLKHERFQSL 649 
XP_003748936  625 NCSDKFAQNLSSKNPKHEHFQSL 647 
XP_005320222  622 NHTDNLAQNLASTNLRHERFQGL 644 
XP_007479356  659 NCFDKSVQNRPSRNPEHEHFKSL 681 
3_pfamImport  199 KCKYQSTQNLPSRNLNHEHFQRL 221 
ELK18290      633 NYTDESAQNLPSRHLKHERFQSL 655 
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