Conserved Protein Domain Family
DUF4875

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pfam16175: DUF4875 (This model is not part of the current CDD release)
Domain of unknown function (DUF4875)
Small protein family, with members present in few proteobacteria mostly Desulfovibrio species, but also a Vibrio phage vB, suggesting a possible phage origin Experimentally determined structure shows a fold reminiscent of a thioesterase/thiol ester dehydrase-isomerase fold, but a functional consequences of this similarity are not clear
Statistics
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PSSM-Id: 522221
Aligned: 10 rows
Threshold Bit Score: 183.754
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGG93543      49 GQALEYVVIFSENWDNQGRPS--GEIVV---FSKAQTFEERAHTTMKAAKDYLESKKLKYVRSYHIPskNKNFLGKGYTL 123
1_pfamImport   1 GEPQKYEILKREDKSKRDTNRvtSFWIS---SPDAVDLSSRAATVKKAAEDLQQKINVPIVLVYLTI--NKEGMGMGYNL 75 
WP_091706695  97 GRAQPYEVIGAEDYSFPGRKRv-RWQIV---APSAQSRGDRAFTAIQAAKDLLKKTEADQATVWLEI--NKELAGKGYGL 170 Marinobacter pe...
2_pfamImport   1 GVAHEYQVIGKDDTSFAGRKRl-RWVIT---APTALTQADRAETAKAAAKALQDQTDADLAQVWLEV--APFAAGQGSQL 74 
WP_095368928 111 PVAHKYTVIDFTDYSFPGRTRl-EWTIM---APTAITAKDRARTAMQAAKDLQEEYQSDVSFILLED--NEVVAGKGFPY 184 Pseudoalteromon...
WP_029094731  29 ATPIAYEIIQDTNTSIGSQRLraSITII---APTAQDKASRAAVVKQAVNDKTEKDKITVVSISLIP--AKSLLGSGALL 103 Budvicia aquatica
WP_170126537  29 AAPIAYEIIQDENTPTGSQRTsaNITIV---APSAQDKASRAEAVKQAVNDKVAKDKTTVVNVSLIP--SKQLLGTGALL 103 Leminorella ric...
Q2SB25        27 SKAATYEVVNQEEISEGDYDYifSCV-----ASKAIGKEERAHTMVKAIMDIQNVSPDIKIALHLAP--DRALCQEGRLI 99  Hahella chejuen...
BBF23256      49 ANLLPYTVLFEKQFKNEHGRSvvEATIAlseSESSIDRASLAATCMAASRYLLAENKTDAAVLKLV---DRRASHSFYEL 125
WP_133039314  72 RRAMSYTVIKSQ--LVHERRStlLVVIT---SPYANGYEQFLGTAIKVARSMAISRNVAAVHVLLEP--NEVLIGKGYQL 144 Shewanella
EGG93543     124 AQAAYSPDSGGTDGDSpLKNDTWE-VSAYEGTVDPVKVKVALLWESMRDEYQieDSSGtYTDEPNLRKAIHKIVGvnVPL 202
1_pfamImport  76 AIARYFSDGCKYSGDE-CDDVIWS-VEATSEVITPEQIRILSEWYNNRKMFL--DKEN-NLNEEKLISFLSKKLK--IPT 148
WP_091706695 171 AIVSFTPDGKGNSGQE-ANSEVWE-VEVAADEVSAEQVRIANAWYANRSKFV--GDDG-LTDEPRLKTYLASELG--IPE 243 Marinobacter pe...
2_pfamImport  75 AMATYTPDGCGASGKD-CDGKKWD-VEASDVQLTQEQLAVWKAWRENRDQFM---EDG-MVNEERLKSFLANKFG--TTP 146
WP_095368928 185 AMAAYCYDVCGMSGQD-CNGVEFK-IKTSDIVLTEQQREIWKSWYTNLNRFK---YNG-TLNEGELTEYLAKKFN--VEK 256 Pseudoalteromon...
WP_029094731 104 AQAEYYADGCGPAGAP-CNGIKWD-VRASDIKITDKAIQIWSQSIKSANELA---KKG-IFEDEKITADVVKKLR--IKP 175 Budvicia aquatica
WP_170126537 104 AQAEFYADGCGFSGSP-CNGVKWS-VIASDIKLSDKDLLIWNQWGISSKEFE---AKG-IFDDNKVAADVAKKLK--IKL 175 Leminorella ric...
Q2SB25       100 GVSYYSPDGSGWKGVG-RGAWTWN-ILTTGKKVTEQEISDTVLYEKSKPEFK--KKFGdLYYSEKLDEYVKSQLG--HEP 173 Hahella chejuen...
BBF23256     126 AHCSYAEDGRGLGGSD---KWTWSgVAAADRTTTADEKAVYELWNNLKIDHL--NKKTlKVDEAALTRAVAKKLK--KKP 198
WP_133039314 145 ADVALYTDGKGEDGQT-FNGVYWQ-ASAMQNPYSPQQLQVASLWFQHQSEYL--DSHG-KINESALKRYIAEQLN--IPD 217 Shewanella
EGG93543     203 SKIHTPmYS 211
1_pfamImport 149 SEILLP-YF 156
WP_091706695 244 SQISLP-WV 251 Marinobacter persicus
2_pfamImport 147 DKITLP-WV 154
WP_095368928 257 EYIKPP-FI 264 Pseudoalteromonas sp. NBT06-2
WP_029094731 176 SEVDVP-YI 183 Budvicia aquatica
WP_170126537 176 SEVEIP-YV 183 Leminorella richardii
Q2SB25       174 KYVTSGlWV 182 Hahella chejuensis KCTC 2396
BBF23256     199 EEIALP-DL 206
WP_133039314 218 FAVKLP-QS 225 Shewanella
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