Conserved Protein Domain Family
DUF4856

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pfam16148: DUF4856 
Domain of unknown function (DUF4856)
This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides and Prevotella species. The function of this family is unknown.
Statistics
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PSSM-Id: 495626
Aligned: 9 rows
Threshold Bit Score: 410.712
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013994198  38 VSYSFERDGESTVSfsgqttrIKMAHELLtnfldes-----ntaeslKAMFAHDDGAADFEDADLNAS-DK------NLR 105 Zobellia galact...
1_pfamImport   1 YEYKFSRNGLSTVD-------LETGKEMI------------------DLFYLLDNGMKIASSQSRNYYeRKgsvyalSMK 55 
WP_009228359  41 PSYQFKRNGGSSVDyl----eCSLLRDPIdyiynsy-----lkiatiMYPANMDKVQSYYTNGEFGL----------KPK 101 Prevotella sp. ...
WP_013996488  36 lKYSFSRNGSSSVDvl----eCELVKEPIdriynsy-----lkraqiSNQSNYDEVMGLFTNGMYHL----------KPK 96  Capnocytophaga ...
AEW85417      41 ATYTFNRNGVTTVDfngqksrILMLQEIAdyvktqgasganvsdvklLNMYANAN--TPFTNGELNSSkTK------QLR 112
WP_011963604  41 ATYTFERNSVTSVDyagqtsrLLMLDEMGnyiktaattatavddaflSDMYENKN--NRFIGAGLNAS-GK------QLK 111 Flavobacterium ...
WP_013187449  38 STYSFSRGGVSTVSfsgqttrILMSEEIVssfsdfd----nateasiDAMFAHEEGANDFSSEDLNAS-NK------SVR 106 Croceibacter at...
WP_013619703  38 ATYVFENNGESSVDfggqttrIQMAEEFIsalldnt-----steeklDAMFAHEENNNDFSNADLNSS-NK------SVR 105 Cellulophaga ly...
WP_013868719  38 NTYVFERDGNTTVSfsgqttrIQMAQEIVsglsnta-----ntetilDNMFAHQEGANDFSDAALNAS-NK------SVR 105 Lacinutrix sp. ...
WP_013994198 106 SKTAASVdYFY-----ANTTDQTLIRADFESWIe--------GQVNEVFANWNVSAAAGIAGQLAD--GE-KIRYVNAKG 169 Zobellia galact...
1_pfamImport  56 DITAASS-YYA-----SKTALQTTVRNEIDTMF---------GELKTISDNSGLEAKKGQAGFVGY--EE-ERRYVDAHG 117
WP_009228359 102 EELAASSlHQA---------DRTRILKDVEDIFtttgtlsglGQSSPG-TARNRRAIPGIGGYVGTniGDvNIAFANDKG 171 Prevotella sp. ...
WP_013996488  97 QEIATSPlHLA---------KKSVIEQDIITLIdvssaiagrGEANPS-DHRNRPANYGRTGYIGQsiGDvNLSFADEKG 166 Capnocytophaga ...
AEW85417     113 DKTAASLdYFS-----SNSVEQAEERVFFE------------NKLREVGSAGAGTATEGVAGIF-------EKRYYSANG 168
WP_011963604 112 DKTAASKdYFSlyqggGSVVEQTEIRNLYVTQF-----------VNAKAASQGINASAGIAGIYTD--GT-SKRLFATNG 177 Flavobacterium ...
WP_013187449 107 SKVAASRdFFS-----TNTTESAEIKADFDGFIa--------DQVNIVFPNQNTAAQPGVAGQIAD--GT-STRYVNESG 170 Croceibacter at...
WP_013619703 106 SKIAASAdYFS-----TNTTASIAIKENFDLWIs--------AQVTEVFPKWDDDAVAGSAGKIQQigGG-STRYVNGKG 171 Cellulophaga ly...
WP_013868719 106 SKTAASTdYYA-----ANTTDAATIKATFDFFIe--------EQVNTVFPNWDTDASAGVAGSIQEagGG-STRYVSEKG 171 Lacinutrix sp. ...
WP_013994198 170 LEYNQLFAKGLIGALMTDQALNNYLSPTVLDESSNRTDNDAGTVLEGKSYTNMEHKWDEAYGYVyGLNADASDPnadl-g 248 Zobellia galact...
1_pfamImport 118 IETGQVLQKALMGVVLLDQILNEHLGEEVLGNAQLQKDNSNLVMVSGKRYTALEHHWDRAYAYM-GRENSKFTP------ 190
WP_009228359 172 LVVAEMFNGMMLGGIYLDKILNVHLNDSLYNDARLRREHENTSLLPGRNYTELEHHWDLAYGYY---------------- 235 Prevotella sp. ...
WP_013996488 167 LVVAEIFNNSLLGAIYLDKILNYHLDEQFFDNAELIAKHENVELLVGRNYTELEHHWDLAYGYF---------------- 230 Capnocytophaga ...
AEW85417     169 LEPIQVVLKGLMGACFIDQICNNYLSTKKLDAGTNREDNTNKKLVVGTNYTEMEHAWDEAYGYVyGAGRDADGKn----- 243
WP_011963604 178 LEPQQVLLKGMMGSCMMDQICNNYLSLNKLDEGTNRTNNTSKVLETGKSYTTMEHNWDEAYGYLyGADNTTTTPnt---- 253 Flavobacterium ...
WP_013187449 171 IELNQYFAKGLIGALMTDQILNNYLSTAVLDEADNRDTNDNDITEEGSAYTTMEHKWDEAYGYLfGASATADNPvatigd 250 Croceibacter at...
WP_013619703 172 LEYNQAIAKSIIGGLMVDQMLNNYLSIAVLDEGTNAADNDAGTLVDGKNYTNMEHKWDEAYGYLyGNEDTPATPelg--- 248 Cellulophaga ly...
WP_013868719 172 LEYNQAFAKGLIGALMVDQIVNNYLSPAVLDAGDNEANNDADVLDGDNNYTTMEHKWDEAYGYLyGNEANPAVPvlg--- 248 Lacinutrix sp. ...
WP_013994198 249 adSFLNEYIGKLE----EDADF-AGIADDIFQAFKLGRAAIVAGDYGVRDAQAEIIREKISLVPAVRGVFYMQRAKATLA 323 Zobellia galact...
1_pfamImport 191 --LFIANYLEKET----KDMPFlAGIDERVYTAFYKGRKAVVDKDYAEMKKQAAIIRGELNKLFAARAIYYLKKGIPDLR 264
WP_009228359 236 --QYWLPFIQTSGlavlRESRI------KIYNAFALGRLALTEFRYQEVQEHLQFIRAELSKVVAVRTMSLLV-GEITLA 306 Prevotella sp. ...
WP_013996488 231 --AFLRPLVQAEGiallKDSER------TLFNAFVQGRIELGRYRYEDMKKHLKIIRSELSRAIAIQIVDILV-GENTLV 301 Capnocytophaga ...
AEW85417     244 -aKFWDSYIDQVN----ADKDF-NTLKGDINLAFRLGRAAIVNNDYVTRDLQIAIIKEKLAKVAAVRAVYYLMEGKKNLV 317
WP_011963604 254 -fKFWSSYINQVS----ADSDF-NTLKADIDLAFRKGRAAIVANDYAVRDAQIDIIKAKIAMIPAVRAVYYLQEGKGKLT 327 Flavobacterium ...
WP_013187449 251 adSFLNKYVGRVE----GDADF-AGTTQTIFDAFKLGRAAIVAKDYEVRDAQAEIIRTEISKVIGIRAVYYLQQGSVAIT 325 Croceibacter at...
WP_013619703 249 kdSFLNKYLASVE----ADSDF-TGIANDIYEAFKLGRAAIVAKDYELRDEQAQIIREKVSKVVAVRSVYYLQSGKEVLE 323 Cellulophaga ly...
WP_013868719 249 adNFLNKYLSRVE----NDEDF-TGIAMEIYNAFKLGRAAIVAKDYALRDAQANIIKEKISEIIAVRAVYYLQQGKADLG 323 Lacinutrix sp. ...
WP_013994198 324 DevpNYASAFHALSEAYGFIYSLRFTRKPGtDAPYFSKAESDELLEELMDDgaNGLWDL--------KAETIDEISEDIA 395 Zobellia galact...
1_pfamImport 265 E---DVRNAFHGLSEAYGFIYALNVARKED-GSSYLSPAEIQQILAEFKGE--HGFWDVdrlaadesTKGSLLNLSKQIA 338
WP_009228359 307 NldeDINNSLVFLSKGCGSIYSLQFTLQPS-GKPYFTYNEVKSYINLLTSG--KGLWDKerllgsetTEGSLKNVAASIG 383 Prevotella sp. ...
WP_013996488 302 NmdeGTGYAFPFISRAYGLIYTMQFARNAE-GKPYFTYEEIQSYLQELKND--KGLWDKdkllsdvnHKGSLKNIASEIG 378 Capnocytophaga ...
AEW85417     318 G---GAAKTFHALSEGYGFIKCLRYTNKQGtNSPYLSKNEVDVILNKLMAGr-NGFWDVd------ySKNNLELLAKEIA 387
WP_011963604 328 Ta--NGAGAFHALSEAYGFILSLRYTNKPGtNNPYFTKAEVDTMLASMISGt-NGLWDIn------tLGLKLDAISTQIA 398 Flavobacterium ...
WP_013187449 326 Nn--DMGAAFHDLSEGIGFVYSLQFTRQPGtNAQLFTRAEVQALIANLLDDgeNGLWNI--------TPESLQEVSEAIA 395 Croceibacter at...
WP_013619703 324 S---DKASAFHSLSEALGFINSLRFTRDTVtDSPVLDAATIDGYMDTLMAG--NGFWDV--------TPATLDQISNEIA 390 Cellulophaga ly...
WP_013868719 324 S---DWASAFHSLSEGYGFVYSLQFTRKPGtNEPYLSKDEVLFYTDSLMEG--NGFWDI--------TPETLDTISNEIS 390 Lacinutrix sp. ...
WP_013994198 396 ERFGFT 401 Zobellia galactanivorans
1_pfamImport 339 DKFGFK 344
WP_009228359 384 KRYGLT 389 Prevotella sp. oral taxon 299
WP_013996488 379 KPFGIs 384 Capnocytophaga canimorsus
AEW85417     388 DKFGFT 393
WP_011963604 399 AKFGFT 404 Flavobacterium psychrophilum
WP_013187449 396 SKFSFT 401 Croceibacter atlanticus
WP_013619703 391 TAYGFT 396 Cellulophaga lytica
WP_013868719 391 AEFSFT 396 Lacinutrix sp. 5H-3-7-4
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