Conserved Protein Domain Family
FXMR_C2
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pfam16098: FXMR_C2 (This model is not part of the current CDD release)
Fragile X messenger ribonucleoprotein 1, C-terminal region 2
FXMR_C2 is a small highly conserved region at the very C-terminus of Fragile X messenger ribonucleoprotein 1, FMR1. The family is found in association with pfam05641, pfam00013, PF16096.
Links
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Statistics
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PSSM-Id: 522182
Aligned: 5 rows
Threshold Bit Score: 96.578
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q6GLC9       507 GFKGNDDQPRPDNRQRNSRETKARTSDGSLQIRIDCNNERSVHT-KTLQNASVE------GSRLRTGKDRVQKKEKSEVV 579 tropical clawed...
3_pfamImport   1 GYKGNEEIQWNESRARNSRDPKPRQQEDSLQIRIDSNNERSVHT-KALQSSFADsgtsnsSSRPRPGKDRGPKKEKQDSL 79 
XP_022539181 485 GGYKTEEMHWSESRSRNSRDSKPRPQEDSLQIRVDSNNERSVHAsRAPQAPTGDa----gAPRQRPVKERGLKKEKQDGQ 560
1_pfamImport   1 GGYKGEDMQWSEPRPRHVRDPKTRAQEDTLQIRVDSNNERSV------QHSSGGr----gGGGQRPIRDRGMKK---DNQ 67 
XP_036743155 464 GFKGNDDHSRTDNRPRNPREAKGRTADGSLQIRVDCNNERSVHT-KTLQNTSSE------GNRLRTGKDRNQKKEKPDSV 536 Chinese pangolin

Q6GLC9       580 DGPQVVVNGIP 590 tropical clawed frog
3_pfamImport  80 DAPRVLVNGVS 90 
XP_022539181 561 DGQ-VVVNGVS 570
1_pfamImport  68 DAP-PLVNGVS 77 
XP_036743155 537 DGQQPLVNGVP 547 Chinese pangolin
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