6TED


Conserved Protein Domain Family
CDC73_N

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pfam16050: CDC73_N (This model is not part of the current CDD release)
Paf1 complex subunit CDC73 N-terminal
CDC73_N is the N-terminal region of the members of CDC73_C, pfam05179. CDC73 forms part of the Paf1 post-initiation complex. The exact function within the complex is not known.
Statistics
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PSSM-Id: 522160
Aligned: 14 rows
Threshold Bit Score: 246.968
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6TED_X         1 MADVLSVLRQYNIQKK--EIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRA 78  human
6_pfamImport   1 MADALSILRDYNISKK--PIDEQEGHVIFGDFSWPKDVKTNYIIWGTGKDGTSKEYYTLESILFLIKNVKLSHPLYVRHA 78 
XP_009026571   1 MADALSILKQYTIDKKinDIIEKDDQIIFGDFAWPKTAKTNYLIYGTGKDGIAKDYYTLDCIVFLLKNVHIPHASYVKQA 80 
1_pfamImport   1 MADPLTFLRTYNINKK--EIIIKDNHILFGDLSWSKTVNTNFLMYGSGKDGAPKEYYTLECLLFLLKNVTLTHPVYVRQA 78 
XP_002069732   1 MADPLSLLRQYNINKK--EILERESQIIFGEFSWPKSVKTNYLKYGSGKKGAPREYYTLECLLYLLKNVMLQHSVYVRQC 78 
7_pfamImport   1 MADPLSFLRQYNISKK--EIIERDNQIIFGEFSWNKNVKTNYLKYGSGKKGAPREYYTLECLLYLLKNITLQHSVYVRQC 78 
XP_002427957   1 MADPLSLLRQYNVNKK--EIIERDGQIIFGEFSWPKNVKTNYLIWGSGKDGAPKEYYTLECLLFILKNVQLTHAVYVRQA 78 
EDO35837       1 MADPLSLLRQYNTNKK--EITEIGDDVLFDEFSFPKTAKTNYVIIKS--Q--PKEYYTLESLLFLLKNVHLSHPNYVQRA 74 
EFX74457       1 MADPLSLLRQFNVNKK--EIIEREGQIIFGEFSWPKTVKTNYLIYGSGKDGAPRDYYTLECLLFLLKNVQLQHPVYVRQA 78 
XP_002109863   1 MADCLSFLRLYNIEKK--DVIETDERIIFGDYSWSKFTNTNYLKYGTGRDGATKEYYTLASLVFLLKNVDISHSVYAQKA 78  Trichoplax adha...
6TED_X        79 ATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIgl--qrST----QVKR--AADEV---LAE--AKKPRIEDeE- 144 human
6_pfamImport  79 AAEEIPVVRRPDRKDLLAYLNGEIATSNNVDKSAPLDItl--qrPS----KVKRvtTTNDDvtnTMEplSKRSRLED-A- 150
XP_009026571  81 AAASVSVVRRPDRKDMLSYLYGEVSSLSSIDKSAPLEIsl--qrPV----QLKR--GAEET---LGDhdSKKPRIEE-A- 147
1_pfamImport  79 AAENIPVVRRPDRRELLAYLNGELSTSASIDRSAPLEI------PT----QVKR--SAVED---VQEsvAKKPRMED-Tl 142
XP_002069732  79 AAEDIPAVNRPDRKELLAYLNGESQTCASIDKSAPLEI------PT----QVKR--SADGDp-iSGEvaAKKPRFEE-T- 143
7_pfamImport  79 AAEEIPAVNRPDRKELLAYLNGETNICSSIDKSAPLEI------PT----QVKR--SIENDg-sAIEslSKKARYEE-V- 143
XP_002427957  79 AAELIPAVRRPDRKDLLTYLNGETSTSASIDKSAPLEI------PT----QVKR--TADES----LEsvSKKPRFEE-T- 140
EDO35837      75 VAAKIPVVRLPDRKALLSYLNGETDTSVSIDKSAPLEMpt--qrSAttliQAKR--PGDEV----VGgeFKKPRVET-E- 144
EFX74457      79 AADSIPVVRRPDRKDLLAYLNGETAASASIDKAAPIEI------PI----QVRR--IAGTAqagGSVpaSKKPRLED-Q- 144
XP_002109863  79 IAAGIPLVSRPDRKDLLAYLNGETSVSASIDKSAPLELgqqhvvPAaplpQVKR--SVDEG---TNSdtLKRVKTDE-D- 151 Trichoplax adha...
6TED_X       145 CVRLDKERLAARLEg-HKEGIVQTEQI----RSLSEAMSVEKIAAIKAKIMAKKRST-IKTDlDDDIT------------ 206 human
6_pfamImport 151 QLAMRNKRLAERLD--RGDKSVTTETI----KSLSDSISAEKIAAMKAKFVARKRKT-IQEV-DDPTEgf---------- 212
XP_009026571 148 SMEKHRVRLAMKLSspSREESVIPSQVinsdSTICQTMSIEKISAIRAKIIARKRKT-IKDD-MLD-------------- 211
1_pfamImport 143 QVQRVKQQLAARLDa-PKESAVNIDNI----KSLSEAMSVEKIAAIKAKRLAKKRTT-IKGH-DDIGL------------ 203
XP_002069732 144 QVQKVREQLAARWDvnQKETAVNMDNI----KSLSETMSVEKIAAIKAKRLANKRTT-IKRT-DNDEAa----------- 206
7_pfamImport 144 QVQSFREQLAARLDvnKKEVSVNIDNI----KSLSETMSVEKIAAIKAKRLANKRTT-IKRN-DNDEAm----------- 206
XP_002427957 141 QVQKVKEQLAARLDa-PKEASVTVDNI----KSLSEAMSVEKIAAIKAKRLAKKRTT-IKGN-DDIGL------------ 201
EDO35837     145 QLRLDKRKLEARLEg-HKEITVTTDQI----RSLSEAMTKEKIAAIKAKRLAKKKTTlIKVD-DELEPe----------- 207
EFX74457     145 QMQRVKEVLAARLEapRQDSLINVNKI----QSLSEAMSIETIASLKAKRIANKRKT-IKGD-TEDMGlglgtslglags 218
XP_002109863 152 -VKVDKNRLESRLEanVKDKVVTTNQL----RPLSERISAEKIAALKAKRIAHKRET-IKDD-TITE------------- 211 Trichoplax adha...
6TED_X       207 -ALKQRSFVdaeVDVTRDIVSRERVWRTRTTILQSTGKNFSKNIFAILQSVKAREEGRAPEQ------RPAPNAAPVDPT 279 human
6_pfamImport 213 gIMTSLLYV---FDITSEVLSRERNWRTRSTVLQSAGKNFSKNVFAILSSIKAKEEGKSQEKdss-svTALLPTKSNPAG 288
XP_009026571 212 --AESHAYVevgVDVTRDIISKERQWRTRTSILQSSGKDFSKNIFGILQSIKVREEGAIKQQvepssnSSNNIVSSQPSS 289
1_pfamImport 204 -GPDLRVMLdfdVDITKDIIKRERQWRTRTTILQSNGKVFGKNIFAILQSIKNREDGRSRP----------SHSMSTTPR 272
XP_002069732 207 mGTDLRAILdydVDSTKDIISRERQWRTRTSILQSTGKIFAKNLFAMLQGIKAREEGRQGRPq----vSNNAIKMPEPPQ 282
7_pfamImport 207 -GTELRAILdydVDSTKDIISRERQWRTRTTVLQSNGKIFAKNIFAILQCIKAREGGGNIRm------TSQTAKVPEPIK 279
XP_002427957 202 -GSDLKVMLdfdVDVTKDIVSRERQWRTRTTILQSAGKVFAKNIFAILQSIKAREEGRHRP---------PVPAPMVTPR 271
EDO35837     208 -ILEQRSFVdaeMDVTRDIVSRERLLRTRSSVLQSTGKPFLKNILAILQSVKAREEGKYKQ---------QQPAVVAVPD 277
EFX74457     219 sSSELRGMLdydFDVTKDILNRERQWRNRTSVLQSSGKVFSKNIFAILQGLKAREDGKLRGHss---iPPGAGRAVVPPG 295
XP_002109863 212 --IEQRSFAdaeVDVSKDIISKEKVVRTRETVMRSAKKSFT-NILDVITNIQLREQGRNLNh------NHKTPPPTEPPP 282 Trichoplax adha...
6TED_X       280 LRTkqPIp--------AAYNRYDQER 297 human
6_pfamImport 289 VKKsaPQ---------AGYSRYDQER 305
XP_009026571 290 TNPskPAiq------pTSYSRYDQEl 309
1_pfamImport 273 VAPpkPTip-----qpTVYNRYDQER 293
XP_002069732 283 RINkpPQqq------lSQYNRYDQER 302
7_pfamImport 280 INKpqPq--------vAQYNRYDQER 297
XP_002427957 272 ATParPApq------pAVYNRYDQER 291
EDO35837     278 AIKkkPEa-------pVAYNRYGQER 296
EFX74457     296 GAP--PGmgppvqqqgPVYSRYDQER 319
XP_002109863 283 KKSvaPI----------PYSRYDQER 298 Trichoplax adhaerens
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