Conserved Protein Domain Family
APD1-4_N

?
pfam16040: APD1-4_N 
E3 ubiquitin-protein ligase APD1-4, N-terminal
This entry includes E3 ubiquitin-protein ligase APD1 to 4 from Arabidopsis. They are involved in pollen mitosis II (PMII) regulation during male gametogenesis. This entry represents a functionally uncharacterised domain found towards the N-terminal of APD1-4 and in uncharacterised sequences, mainly from arthropods.
Statistics
?
PSSM-Id: 495540
Aligned: 24 rows
Threshold Bit Score: 63.4184
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_002264526 147 GPMLYGF--YKVPPLEVITT-WDQKLKAYTAPYSHREWVYYLNKGSQVNITYSVSslsSSSLILVIAQGNEGL 216
EFN74173      65 NGTFNAFqmTQRPEITSKRKhLRLKKSMSLPDDTLEYWGFYLLKGATVTLSVCSR---FPGASILVVKGERNL 134
XP_002424728  12 NSSFNAYlmGSEPEVSNKKKrITLKKSMKIPDDTFEYWGFFLPKGSQMELTVCSK---MEGARILVVKGGRNL 81 
XP_008193249 103 NTTFNAFqlSGKPKLSHKRKhIRLKKSMRLPDDTLEYWGFFLLKGAIVKLRVCSR---YEGSRILVVRGEKNL 172
XP_002002561  65 NSHFNAFqlRNKPEISTNRKhIRLKKSMTLPDDTLEYWGFFLLKGARVSLKFCSR---YNGSRLLVIKGKREL 134
Q16JE5        65 NTSFNAFqlNQKPEISQNRKhIRLKKSMSLPDDTLEYWGFYLLKGATVALKVCSR---YDGSRILVVKGERNL 134 yellow fever mosquito
XP_046436834  99 NSSFDAYlmANRPTLTPKAQmLTMTRHFELDDDLKEFWGFYLLKGSEVTVSTCAR---YLGANVMLIKGINSL 168
XP_046436842 102 ISLIDSYlmDRNPIASYQTQ--KMTHHFELDDDLKEFWGFYLLKGSKLTIRSCAR---YMGATVMLVKGNSSL 169
2_pfamImport   1 NATFNAYlmPEKPSMLPKMEfVEMERHITLEDDIKEYWGFYLLKDSIVKVSTCSR---WPGASIIVIKGHKHL 70 
EFN82625      64 NATFNAYlmSGEPAVESEALpVSMTRQLILQDDMKEYWGFYLLRGSSVTVSTCVR---WPGASLTIIRGHKHL 133
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap