8XI2,8RO0


Conserved Protein Domain Family
EFTUD2

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pfam16004: EFTUD2 (This model is not part of the current CDD release)
116 kDa U5 small nuclear ribonucleoprotein component N-terminus
Statistics
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PSSM-Id: 522134
Aligned: 121 rows
Threshold Bit Score: 87.6765
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8XI2_C          4 DMYDEFGNYI--------------GpALE--DS-EEeeeehqvqhgfggsegadDEDga-----------------pgPG 49   Chlamydomonas...
A0BVQ2          5 NNYDEFGNYI--------------GpEID--SEeEDnvqieeeqmaendqehviANRvyi-------------------- 48   Paramecium te...
XP_002492107    4 EIYDEFGNLI--------------GgENDslASsSEseienisgekseeesdvaSHN----------------------- 46  
Q54R72          4 NLYDEFGNYI--------------GeSL---ED-EEvtydqqqqqqeeeeeedrKPNqqqqq-----------qqyndDE 54   Dictyostelium...
XP_003290031    6 ELWDEFGNYI--------------GpDLD--EN-EDqlyeieqqaqqeqeedhkETNgy-----------------nqDE 51  
XP_020432086   36 gvdddeGNDLt-------------GiDMS--RDdADrdndedhdhhsnglngngRQQn--------------------DR 80  
XP_004356308    5 PIFDEFGNLI---------------------EDvEDienideqqdydddeeervARDeqqnght-------taadgdgDE 56  
Q5CU80          5 DVYDEFGNYIvkddndsegsadwvGsEET--SDpEDshnnkdgeifdhaqkeesEDSgsdifsenewqkhkgqvkilnKQ 82   Cryptosporidi...
XP_002142411    5 EIYDEFGNYI--------------GtESE--SN-LDleislde----------------------------------ded 33  
CCE84442        4 DLYDEFGNPI--------------GgQDD--EQfDSessnasnlahsddeasesGVD----------------------- 44  
8XI2_C         50 damQEDDDE-----G--------------------GPGMAVVLHED--KKYY-----PSAEE------IYGAEVETLVME 91   Chlamydomonas...
A0BVQ2         49 ----------------------------------pnqQVAVILNED--KQYY-----PDAQQ------VYGRDVEINVQE 81   Paramecium te...
XP_002492107   47 -------------------------------------ENESPQQNN--QQLV-----PTFEK------VYGNEVEVLIEQ 76  
Q54R72         55 ahiEETGDNdggdeMnidrd-----------niqiSTTSAIVLHED--KQYF-----PDASD------VY-KGVEVMVQD 109  Dictyostelium...
XP_003290031   52 phiEETNDDdeermNldnn------------irqvTTSSAIVLHED--KQYY-----PDAND------VY-KGVEVMVQD 105 
XP_020432086   81 mevDNELK-----------------------------SNAIVLHED--KKYF-----PDASE------VY-HGAEVMVQD 117 
XP_004356308   57 pmvQEEEEDshvefKt------------------rQPGNAIVLHED--KQYY-----PDASE------VYGQDVEVMVQD 105 
Q5CU80         83 sikDEDHEMtqe----------------------tdDDNKIVQFED--KEYY-----PDPSD------VYGDDVEILVQE 127  Cryptosporidi...
XP_002142411   34 qssDSQKNPthdptEvddvkminginrivdgmdieMDNEAIILHEH--KEYY-----EDADK------IFGKDVEILFED 100 
CCE84442       45 ---DEMRNDe--------------------------aETNLVLHADagKEHTiedvdADSHKalslktVYGKGVETIVAS 95  
8XI2_C         92 EDAQPLEVPIVAPVKVKKFETLEAE 116  Chlamydomonas reinhardtii
A0BVQ2         82 EDAQPITQPMIAPLKSKEFDIQETQ 106  Paramecium tetraurelia
XP_002492107   77 EDAQDINVPLVQPEIVKSVKIEETD 101 
Q54R72        110 EDSQPLSKPIIDPKKNKSFTITEKD 134  Dictyostelium discoideum AX4
XP_003290031  106 EDTQPLSKPIINPQKNKTVSIQEKD 130 
XP_020432086  118 EDTQPISKPIIAPTRTRTFALTEQD 142 
XP_004356308  106 EDTQPISKPVIDPGSKRSFLVADKE 130 
Q5CU80        128 EDHQHIDEPLISPLKENKFDLIEKN 152  Cryptosporidium parvum
XP_002142411  101 EDMHHIDTPTIVPLKDNKFDLVEGD 125 
CCE84442       96 EDVPMEDEPVIKPLTETKMKVEYTD 120 
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