Conserved Protein Domain Family
TnsD

?
pfam15978: TnsD (495493 is an unknown moldel)
Tn7-like transposition protein D
TnsD is a family of putative Tn7-like transposition proteins type D.
Statistics
?
PSSM-Id: 495493
Aligned: 15 rows
Threshold Bit Score: 300.101
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012411606           204 IATDIDW-----LLN-NCPFVPGLEALYQKYLSLVKTNPELvTYTGRIRVQELLRLFKNHYPS-QVLNWLQCPLD-EQIR 275 Nosto...
WP_011838277           202 IAQDAKV-----LLE-NQYPNKQFKWFAKQYLERFKELGYA-NINGKVYWEEVIKDFIDFYGL-EFLNAVCSNIE-DKEQ 272 Aceti...
WP_009568473           205 IAKRSAA-----LLD-HPPARPSFRDWSAYYRSAVIDRGFG-KGKENVAQNLLREAISSLFEP--VIDLIPGGLG----- 270 Acidi...
WP_013293194           205 LARLSTE-----LLE-SPPTPRTFAGWTVFYRDRMIETGLA-LSDCRMDQQRFSQEFRNFYG--RTLELFKNLLDgNGFS 275 Galli...
PRJNA61369:DESME_01020 204 IARDVKF-----IID--NVSNLNVDLLRQKMFERCTDKHYF-KPSGAFDNNKLYNELQVESDQ-QLLRSVGLSLEyLSNR 274
WP_012446735           200 vSKAAYF-----LLN-NDLSEANKDTILKRYKSLLFDRDLA-NTNLRVRQKDLHNSLVGYFGE-HFLNVLQSLPD-ENDE 270 Natra...
WP_014822435           208 SNKLIELdsldsALN-----------MQEVYKYLLQINGYA-NYFGKINQEKLAEQFVRFYGD-ELLELLNLTVD-KENP 273 Solib...
WP_013486849           205 QAED--------LLN-RKYQNQTFSHFTQFYRYHLIEKGYA-SLKGQVKQKALYDAFYNLYSE-ELLNTLCI----EPRA 269 Evans...
WP_012406131           204 MRRSVEL-----LTTlPQPLNPST---HEYYLFHADAAGFV-RPNGFLKTDTIRTGIIEMYGE-EYLETAGLTLP--SNN 271 Parab...
CAL63329               198 LAHLSID-----LLQ-ANLSPIDTKLRTVVYRQALLAKGLC-TRNNKIKLDALAIEVRRYYEDfSSFEHQDRLLSsQKEP 270
WP_012411606           276 DNWLAQLVRFPKRVHHPLRHLLFIHFL-GYTAQEFFELKE----APKAFGNALWPCLNPVCKYFN---KPQIKECLITYN 347 Nosto...
WP_011838277           273 GRWLKEITHSDAKSVYPIRHLMLARFL-GIGVEELFIKEL----NYRPFGEGPWVCLNPAADHFL---EPVIKDVEIKYR 344 Aceti...
WP_009568473           271 DDWPTAMVRKHRKAFHPLRHVLFQIFL-DKRSPQRR--------TETPFGKGPWPCFNRLADHYG---QDVIYEIAVRHE 338 Acidi...
WP_013293194           276 GNWLKIMVRKHRKASHPIYHLLVQNFL-ALRER-----------HVSRFGTGPWACLNPLAQHRT---ATPIKEVTEHNN 340 Galli...
PRJNA61369:DESME_01020 275 TA--QKLLNITGRPKNPLLYILGMQYL-GKSAKNFVFSKKreldCS----YGPWQCKNPYCPDFN---KPGIAESKRKYR 344
WP_012446735           271 YNWLRVATRNVKRTVPPLRHILLITFLtDGHIERFFDDIKv---ENKPFGGGPWPCLNTASNHYK---KNVINEVTVAAD 344 Natra...
WP_014822435           274 SCWLKAITRKHRKSFHPIQHILLLNFF-EVSVEELKDIVGk---KYNPFGEAPYYCLNPAADHYQ---ERIIKQIIITNC 346 Solib...
WP_013486849           270 TQWIANFSRKHRKSFHPYYHLLMLNFF-DLKVNAAFEETSf---ENTPFGHPNWPCLNATCPDYK---KNAIPEITIRRC 342 Evans...
WP_012406131           272 RIWPVKLIRG-EKYSHPLQHVLLDHFL---KVRRLSSDIVrl------tkATPYLCPNPYGAHGP---AHNIDAVLIQEQ 338 Parab...
CAL63329               271 LRWLRDVVDRSDRAMHPICHLFLIGFL-FGSIDRFKQVLEqttkSQE---LQVTDVPNADKSHHLlvdHPAIKDGSK--- 343
WP_012411606           348 QESRKPTGTFFC-SCGFVYSRIGADQSPE---DQFRFSKIKVYGSVWEESLKVFWED----------SSLTLK------- 406 Nosto...
WP_011838277           345 RRNKNTNGFFRC-PCGYEYMETVTREQGErgkGRRRFVRVVEYGHVWKAKAHELHE-----------SGVSIQ------- 405 Aceti...
WP_009568473           339 QN--RVIGRFSC-ACGFVYSREVGSRSSP---------RILDFGPLLDGQIRQKVA-----------EGLGLR------- 388 Acidi...
WP_013293194           341 HG--KITGVFTC-NCGYVYTRSFNSATSE-----VGPPRFQQYGPLLKPALRKLID-----------DGVSRR------- 394 Galli...
PRJNA61369:DESME_01020 345 KERQKVILECSCpSCGYSYTIS-ENVNEI---SGHDIDSVLSIG--WRAALIILDYYlknekldrvfASLRIKqkqqiiv 418
WP_012446735           345 YKTRKPVGTFEC-SCGFTYSRRGPDKSNS---DKYRIGRIKNFGPIWEGRLRYLLEQ----------GSLSQN------- 403 Natra...
WP_014822435           347 TDTRNPVGTFKC-TCGFIYSRRGPDLAIE---DQFKIGRIKDFGFTWFQKLNRLINL----------EGKTYK------- 405 Solib...
WP_013486849           343 EKTKKLIGRFTChTCDFSYTRKGMDPNKD---DCYKFSRIMDFGFLWKRELQLLLN-----------KGLSYR------- 401 Evans...
WP_012406131           339 ADGS-RIGKACC-RCGLKFWFERCRTGTV----IPEISHIVVFGNDWHRAARKLKA-----------EGMSVD------- 394 Parab...
CAL63329               344 -------------SCRLAASESGLSITTV-------VERRRKLGIPVSERRKHLYPDvvnainadlkSGEKID------- 396
WP_012411606           407 --------EISQCLGVQVKTVLRQAD-KLKLTFPRPNTKARATElcpslkprv-----------fsfiqapdiLESWRKQ 466 Nosto...
WP_011838277           406 --------EIAVRLNADISTVRKYIS-EKGQEKSKKLVERNSVAsaef----------------------evkRQYHREK 454 Aceti...
WP_009568473           389 --------AVAKYLAIDPGTVRLHAS-RRGLNVPWKPLAARHSRtlv------------------------pdRDAIRIR 435 Acidi...
WP_013293194           395 --------KIGQILQLDPKTVFRLTR-ALD-------------------------------------------IEKQSKQ 422 Galli...
PRJNA61369:DESME_01020 419 ekkacyviETAKQSSFNLSRLLSSSN-ELQFLN---------RVlsskdipyfikdyitnpfgwkygpkvefnLEKDKLD 488
WP_012446735           404 --------AIAKELNCASGTVKKYKQ-KLFSEGRSTSKSNDIMKktk------------------------syGRNLLEK 450 Natra...
WP_014822435           406 --------EAAKELHCDIATVIKYAKqKLSDEVDDISINIKASI-----------------------------TDLKEKE 448 Solib...
WP_013486849           402 --------EVARILGVDTNTVIKYEK-KNIENKQKAKVRIDSDL-----------------------------VKEHRYE 443 Evans...
WP_012406131           395 --------DIAIEMGITRKQVVRILK-RKTGNHKYTPSKKE--------------------------------ILEWRKQ 433 Parab...
CAL63329               397 --------VIAREHAVSICSVYRILR-SNSDIATERLVLKTQQL-----------------------------KTRKRLE 438
WP_012411606           467 WLEAIEANP---DAGRTQLRSKAPAIYGQLYKYDKNWL---LKHLPPPLKNNGT---LNVDWHNRDVETVEAVKVAARRL 537 Nosto...
WP_011838277           455 WLQIVRENP---DKGRLELRRLGKYTCTWLCRNDREWW---EKNTPAKKYVQAY---SNVDWETRDKEILQHVKQTVQEI 525 Aceti...
WP_009568473           436 WLDMQQNYA---DLSRRRLALLLPKEHSWLYRHDREWL---EQHSPTALHKKWSd--QRVDWETLDRSMAIQLRKAAREI 507 Acidi...
WP_013293194           423 CKSPSKDAPlkiPAKNTSIKKQ-------------------LASSPGKNISAS----FRRDWVEVDEACIAKLSSLPALI 479 Galli...
PRJNA61369:DESME_01020 489 LLESIRSYP----DRESIVRNVGKCTYNKLMQKESAWM---KEVLPSRNFNF-----KSLDWEQIDGELETVLEQVITKT 556
WP_012446735           451 YKGLIENCVcskKLSRTEIRTQFSKEYTYLYRHDRDWLf--ATMPPAKKPVAIPn--NRVNWQERDEKLLEAYKKAYSKL 526 Natra...
WP_014822435           449 WIELINAHP---TLTITSIRKLNPALYSWHYRNNKGFL---DNNKPKSKTKLIIn--NRVNWDKRDEETLNQVIEVLEVL 520 Solib...
WP_013486849           444 WIHLQRDFP---GLSKTELRKKRPEVYAYLYRHDRDWL---KVNSPKRKKVDPTn--NRVNWLERDKEILEKVQKVVSEL 515 Evans...
WP_012406131           434 FKELLRKVG---SSGHRGAWMLNPQLSNRLALHDSDWFkgsATRSALKRDANLTk--PRCDWSARDHRWSLELRSAAARL 508 Parab...
CAL63329               439 WMALIDSEG---RNGLNAVRARGLDLFAWLYRNDQDWL----KNENLRCQVVTRrgiSRIDWLSRDFLFSKSVVTVVGEM 511
WP_012411606           538 KqDASRPIWISRTAIANFLDhpASAWVKRHLNRLPMTAKIL 578 Nostoc punctiforme
WP_011838277           526 LeSDEKPQRISLRLIKTKSG---LKSFDLQLDKLPLTKSFI 563 Acetivibrio thermocellus
WP_009568473           508 T-REVPPQRVTQAALERKLG--RPLRMSEQQAKLPKSIGvl 545 Acidithiobacillus
WP_013293194           480 Y-KESPPVRITFAELNRRIG--KRDWLLTHQHLLPQTKAFL 517 Gallionella capsiferriformans
PRJNA61369:DESME_01020 557 Y-SFPPKNRIQKYTLIKQMTsrDKARIERFPYRLPRTIDRL 596
WP_012446735           527 L-NLDEPIRITKTRLGRETG--TLSLIQNNSNKLPLSTAYL 564 Natranaerobius thermophilus
WP_014822435           521 Y-RKEKPVFVNKNSVRKYIY--NPSFIEKHLEKLPKTKEYL 558 Solibacillus silvestris
WP_013486849           516 RgIDKKPVRITVKILGDGIG--ERALLERHLDKLPETRVFI 554 Evansella cellulosilytica
WP_012406131           509 KtFERKPVRATLRTICTEARlpEVGSSRVIRKKLPQCAAIL 549 Paraburkholderia phymatum
CAL63329               512 R-KEKKRRRISKTMILRHLG--CEVLLHKFSDKLPRLRSAL 549
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap