Conserved Protein Domain Family
Nucleoporin_FG2

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pfam15967: Nucleoporin_FG2 
Nucleoporin FG repeated region
Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Statistics
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PSSM-Id: 495488
Aligned: 4 rows
Threshold Bit Score: 687.589
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005990604   1 MSGFSFGGGAG----AGGGGFTLGAAAaaaaaaaaaagSNPGSTGGFSFGTLGAAP----AVATTTATTLGLGGGIFGQK 72 
2_pfamImport   1 MSGFNFGSGGGlgstTAGGGFSLGAAT-----------SNPTGTGGFGLGTLGAATasgtATTTTTASSLSLGSAVFPQK 69 
1_pfamImport   1 MYVIIFD--------ICFSCWFLSVCLtsdsvitsvcsAPAASTSGFSFGTVLGTAaatpAS-TTTTASLGLGGNPFGQK 71 
XP_011606140   1 MSGFNFGSGILgs-sTTGGGLSFGTAAs----------APATSSGGFSFGSALGAPa---APATSTTTALALGGGLFAQK 66 
XP_005990604  73 PATGFTLGatNPGTTTASSG---GLTLGAPAA-TSAASTGFSFGFNKPAGSATPFALp------ISSTSGSGLSLSSVLT 142
2_pfamImport  70 QATGFAFG--TPASGTAATGpvtGLTLGTPAAtTTASTTGFTLGFNKPAASATPFSL-------VTSSAPGGLTLGSSIA 140
1_pfamImport  72 PTGGFSFN--TPTSS------------GAPA--STAATTGFSLAFSKPTASASPFSLtt---stASSTVGTGLSFGSILT 132
XP_011606140  67 PTGGFSFN--TPASS--AAAptaGLTLGTPA--SSAASTGFNFAFNKPTASATPFSLttvatpsSSAPAGAGLTFGSVLT 140
XP_005990604 143 STAAPS-GATGFTL-NLGNAPATATTASTGLSLGSTLSTLTGALFQNASTAapGLGQTALGlt-------lGASTTAPTS 213
2_pfamImport 141 SSTAQT-GSTGFAL-NLGGTNLTSAPGSTGLTLGSTLAGLGSGLFQNTAAT--GLGLGALG----------SATSSAPVA 206
1_pfamImport 133 STAPQQpAATTFSL-GLGGSTASTAA--------STVPSLGGSLFSSSVSTgs-----------------lLGTSTAAST 186
XP_011606140 141 ATAPQQpAASGFTLgGLGGAT----T--------TTVNSLGGGLFSSTIST--GLGQTTLGaggglnfgtlLATSTAPTT 206
XP_005990604 214 --VASEGLGGIDFSSSSDKKSDKaSGTRPEDSKALKDENLPPLICQDVENFQKFVKEQKQVQEEISRMSSKAMVKVQDDI 291
2_pfamImport 207 --SAGLGLGGLDFSTSSEKKSDK-SGARPEDSKALKDENLPPVIYQDVDNFQKFVKEQKQVQEEISRMSSKAMLKVEEDI 283
1_pfamImport 187 apAPSIGLGGVDFSTSSENKSDTlSGSS-EDSKVLKDENLPPVICQDVENFQKFVKEQKQVQEEISRMSSKAISKVQDDI 265
XP_011606140 207 apAPSIGLGGVDFSTSSENKNDTsSGTSALDIKALKDENLPPVICQDVENFQKFVKDQKQVQEDISRMSSKAISRVQDDI 286
XP_005990604 292 KALKQLLSVAASGLQRNTLAIDKLKVETAQELKFAEIALRTQKTPPGLQHENSAPADYFRALVEQFEVQLQQYRQQIEEL 371
2_pfamImport 284 KSLKQLLSVCASGLQRNSLSIDKLKIETAQELKNADIALRTQKTPPGLQHENTAPADYFRGLVEQFEVQLQQYRQQIEEL 363
1_pfamImport 266 KNLKQLLSVNASGLQRQALAIDKLKQETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVEQFEVQLQQYRQQIEEL 345
XP_011606140 287 KNLKQLLSVSASGLQRQGLAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVEQFEVQLQQYRQQIEEL 366
XP_005990604 372 ENHLATQANSLHITPQDLSMAMQKLYQTFVALAAQLQSVHENVKILKEQYLGYRKTFLGDASDIFEARRAETKKWQSIPR 451
2_pfamImport 364 ENHLTTQASSSHITPQDLSLAMQKLYHTFVAVAAQLQSVHENVKILKHQYLGYRKAFLEDSTDVFESKRAANKKWESAPR 443
1_pfamImport 346 ENHLTTQSSGSHITPQDLTMAMQKLYQTFVAQAAQLQSVHENVKILKQQYLSYRRAFLEDTTDIFETKRASNRKWQSASR 425
XP_011606140 367 ENHLTTQSSGNHITPQDLTLAMQKLYQTFVAQAAQLQSVHENVKILKHQYLSYRRAFLEDSTDVFESKRASNRKWQGTPK 446
XP_005990604 452 VTTGPTPFSSIPNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFASGIGTGLQSSGLGSSSLGGFGSSSGFGSSNTGSS 531
2_pfamImport 444 VTTGPAPFSTVPNAAAVAMAATLTQQQQPATGTQPSLGVSFGAPFGSGIGTGLQSSGLGSSGLGAFGSGPGFGSVTSGGS 523
1_pfamImport 426 VTTGPAPFSTVPNAAAVAMAATLTQQQQPTPGTQAPLGAGFGNPFASAVGTSL-------------------GSSTLGGT 486
XP_011606140 447 VTTGPAPFSSVPNAAAVAMAATLTQQQQPTPG---------------------------------FGGGPGFGGVGSGGS 493
XP_005990604 532 SFGFGST--SKPSG-SLSA---GFGSSTTSGFNFSNPGITASAGLTFGVSNPSASTFGTGqQQLIQLKKPPVGNKRGKR 604
2_pfamImport 524 SFGFAPS--NKPSGgSLSA---GFGSSSTSGFNFSNTGITASAGLTFGMPSAPATGFGAG-GPLLQLKKPPAGNKRGKR 596
1_pfamImport 487 TSEFWKMllHLPMTwMSFLcplGFGSTSSSGFNFSNPGINPSAGLTFGVSNQPAVGFGAG-GPLLQLKKPPAGNKRGKR 564
XP_011606140 494 SFAFSST--SKPTGgSLSA---GFGSSSSSGFNFSNPGINPSAGLTFGVSNQPVAGFSTG-GTLLQLKKPPAGNKRGKR 566
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