3WSX,6FFY


Conserved Protein Domain Family
Sortilin_C

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pfam15901: Sortilin_C (This model is not part of the current CDD release)
Sortilin, neurotensin receptor 3, C-terminal
Sortilin_C is the C-terminal cytoplasmic tail of sortilin, a Vps10p domain-containing family of proteins. Most sortilin is expressed within intracellular compartments, where it chaperones diverse ligands, including proBDNF and acid hydrolases. The sortilin cytoplasmic tail is homologous to mannose 6-phosphate receptor and is required for the intracellular trafficking of cargo proteins via interactions with distinct adaptor molecules. In addition to mediating lysosomal targeting of specific acid hydrolases, the sortilin cytoplasmic tail also directs trafficking of BDNF to the secretory pathway in neurons, where it can be released in response to depolarisation to modulate cell survival and synaptic plasticity.
Statistics
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PSSM-Id: 522087
Aligned: 285 rows
Threshold Bit Score: 93.1475
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3WSX_A        560 TEPGEKSTVFTIFGSNke--nvHSWLIL-QVNATDALGVPCTeN-DYKLWSPSDe----RGNE-CLLGHKTVFKRRTPHA 630 human
XP_006633438  556 SEPGTKTMNISVWGYRteedskVTWVSV-TIDFEELLTRDCE-DkDYVLWLAHSsneesSDNDgCVLGYKERFRRLKKLS 633
XP_004069319  554 SEPGSRSMNVSLWGYRnd----fSKWVVvTIDFKKLLTRDCD-DgDYVEWLAHSad-rsGSSDgCVLGYKETLLRLRKDS 627
35_pfamImport   1 SEPGSRSMNVSLWGYRnd---fSKWVVI-TIDLRKLLTRNCT-EgDYVAWLAHStd-psGSIDgCVLGYKETFLRLRKES 74 
XP_015198036  562 SEPGARSMNVSIWGYResl-lsQYWVSI-TIDFNDLLTRDCG-EkDYVEWLAHSdd-lsDPNDgCMLGYKEKFLRLRKDS 637
66_pfamImport   1 SEPGARSMNVSIWGYRds--ylSQYWTSfTIDFKELITRTCEd-sDYVQWLAHSdd-isDPDDgCLLGYKEKFLRLRKDS 76 
NP_001119937  567 SEPGARSVNVSLWGYEda--miSHWVTY-TIDFKDLLKRNCE-SdDYVQWLAHSdd-isDPEDgCMLGYKERFLRVRKDS 641
XP_014341441  554 SEPGAKSMNVSIWGYKkgl-laLYWISI-TIDFEELLTRDCQ-DeDYTKWLAHSsd-lnDPSDgCILGYKEQYRRLRKAA 629
29_pfamImport   1 SEPGAKSMNVSIWGFQes--flSRQWISyTIDFNDLLSRDCE-EkDYTKWLAHSsd-psDPADgCILGYKEEYLRLRKFS 76 
XP_064418013  587 SEPGTKSMNISIWGYRpkqgysAVWISV-TIDFEELLTRVCD-EnDYITWLAHStg-aeNEMDgCILGYKEKFRRLKKSS 663 coelacanth
3WSX_A        631 TCFNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDLSleVCvpdpefsGKSYsPp----vPCPv----GS-TYRRTRGYR 701 human
XP_006633438  634 VCRNGRDYIVSKEETPCPCTRHDYLCDYGYYRHEnSS--EC-------IEQPaFenhtleLCLn----GQeELLQTSGYR 700
XP_004069319  628 VCWNGRDFVVRRKPSPCLCTEVDYHCDFGFYRPENSS--ECvmqeevkGRALe-------FClnd-taEQ---LQTSGYR 694
35_pfamImport  75 VCWNGRGYATTKKLSRCTCTMDDYHCDFGYHRPEnSS--EC-------VEQEeMkghpleFCLn----GTtEQLQTSGYR 141
XP_015198036  638 VCWNGRDYVVNKQPTPCPCTLDDFQCDFGYYRPEnSS--EC-------LEEPdLkgqvleFCLh----GKqEQLQTSGYR 704
66_pfamImport  77 VCWNGRDYEVSTEPTPCSCTLDDFMCDFGYYRKENSS--ECveqpdltDKVLe-------FClqg-keEQ---LQTSGYR 143
NP_001119937  642 VCWIGREYVVNKQPTPCVCTLDDFLCDFGYYRKEkSS--EC-------IEQAeLkghdleICIh----GKkEQLQTSGYR 708
XP_014341441  630 VCRNGRGYIVVKQPSVCICTLADFLCDFGYYRPEnQS--EC-------IEQLdLkghdleFCLh----GKqELLLTSGYR 696
29_pfamImport  77 VCQNGRDYKVTKQPSVCTCTLDDFLCDFGYFRPENQS--ECveqpelkGHDLe-------FCLygkkeRL----KTKGYR 143
XP_064418013  664 VCRNGRDYIVSKDQKPCLCTKDDYFCDFGYYRKEnSS--DC-------IEEAdLkghdleYCLn----GNeELLKTKGYR 730 coelacanth
3WSX_A        702 KISGDTCSGG-DVEarleGELVPC 724 human
XP_006633438  701 KVPGDKCEGGfTPQrkekNINKQC 724
XP_004069319  695 KIPGNQCEGGfQPTrketDLGKIC 718
35_pfamImport 142 KIPGDQCEGGfQPErketDLRKMC 165
XP_015198036  705 KIPGDKCEGGtLPQrkliDLSKNC 728
66_pfamImport 144 KIPGDKCEGGeVRFrqeiDLSKRC 167
NP_001119937  709 KIPGDKCEGGkQPErkviDLSKRC 732
XP_014341441  697 KIPGDKCEGGaMPSrtvkDMRTKC 720
29_pfamImport 144 KIPGDKCVGGeNPTreetDLKKKC 167
XP_064418013  731 KAPGNKCEGGfEAEri-eeVKARC 753 coelacanth
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