4IU6


Conserved Protein Domain Family
zf-C6H2

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pfam15801: zf-C6H2 (This model is not part of the current CDD release)
zf-MYND-like zinc finger, mRNA-binding
zf-C6H2 is an unusual zinc-finger similar to zf-MYND, pfam01753.This zinc-finger is found at the N-terminus of Pfam families Exo_endo_phos pfam03372 and Peptidase_M24 pfam00557. The domain is missing in prokaryotic methionine aminopeptidases, and is a unique type of zinc-finger domain. It consists of a C2-C2 zinc-finger motif similar to the RING finger family followed by a C2H2 motif similar to zinc-fingers involved in RNA-binding. In yeast the domain chelates zinc in a 2:1 ratio. The domain is found in yeast, plants and mammals. The domain is necessary for the association of the methionine aminopeptidase with the ribosome and the normal processing of the peptidase.
Statistics
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PSSM-Id: 522031
Aligned: 99 rows
Threshold Bit Score: 64.5556
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4IU6_A         9 CETDGCSSEA-KLQCPTCIKLGIQG--SYFCSQECFKGSWATHKLLHK 53  human
XP_002111645   9 CETTGCGKAA-KMRCPSCIKLSISA--SYFCSQQCFKNYWPLHKLLHN 53 
Q22RC8        25 CSTIGCGKPA-SMHCPTCLKLGLAP--SYFCSQDCFKTFWPIHKLFHK 69  Tetrahymena thermophila SB210
XP_004035369  25 CSTISCGKAA-KMTCPTCTKLGLPV--SYFCDQDCFKSFWPIHKLYHK 69 
A0BTT5        10 CQTIDCSKPA-TLQCPTCIKMSLAP--AYFCDQECFKRYWPIHKTYHK 54  Paramecium tetraurelia
XP_020436666  17 CLTPNCGKKA-SLHCPVCEKLNLPV--ANFCSQECFKSYWPIHKIKHL 61 
XP_003283011   5 CATPGCGKYA-KLQCPTCFNLNLDNp-SNFCSQACFKSFWPIHKIYHQ 50 
Q54WU3         6 CASPGCGKPA-KLQCPTCVNLKLETp-SHFCSQECFKTFWPLHKMYHQ 51  Dictyostelium discoideum
NP_500396      7 kkcIGCQKPA-KLRCPTCIKMSLPD--AYFCDQSCFKAFWPIHKFSHS 51  Caenorhabditis elegans
XP_047803844   9 CSTNGCGKLAsKLECPKC-KQDPNLpsRFFCSQSCFKQAWVEHKIfyh 55  Puccinia striiformis f. sp. tritici
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